RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 EIF3EP60228 445 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 OTUD4Q01804 1114 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 NCF4Q15080 339 aa17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 INPP5JQ15735 1006 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 ZNF789Q5FWF6 425 aa17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 JMJD6Q6NYC1 403 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 DARS2Q6PI48 645 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 TMTC1Q8IUR5 882 aa17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 KLHDC8BQ8IXV7 354 aa17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 OR1L3Q8NH93 324 aa17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 ALS2CR12Q96Q35 445 aa17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 TBL1YQ9BQ87 522 aa17.27■□□□□ 0.36
SHKBP1-227ENST00000602011 ESPL1Q14674 2120 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 BTN3A3O00478 584 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 KCNN4O15554 427 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 LDB2O43679 373 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 IPO13O94829 963 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 ALPPP05187 535 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 ACRV1P26436 265 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 PSMB4P28070 264 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 MC4RP32245 332 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 SHMT2P34897 504 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 RWDD2BP57060 319 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 ABRQ12979 859 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 BOP1Q14137 746 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 PARP6Q2NL67 630 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 PRR30Q53SZ7 412 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 DENND5AQ6IQ26 1287 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 TTC13Q8NBP0 860 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 FDCSPQ8NFU4 85 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 OR52E1Q8NGJ3 308 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 OR13C4Q8NGS5 318 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 PROKR1Q8TCW9 393 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 DENND1AQ8TEH3 1009 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 STYXQ8WUJ0 223 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 GORASP1Q9BQQ3 440 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 ACTR10Q9NZ32 417 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 OR6C2Q9NZP2 312 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 LUZP4Q9P127 313 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 FAM8A1Q9UBU6 413 aa17.26■□□□□ 0.35
SHKBP1-227ENST00000602011 MED13Q9UHV7 2174 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 SHANK1Q9Y566 2161 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 GOLGA6L9A6NEM1 432 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 BTN3A1O00481 513 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 PEX12O00623 359 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 PJA2O43164 708 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 ZNF749O43361 778 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 IPO7O95373 1038 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 ST6GAL1P15907 406 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 NSG1P42857 185 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 ARCN1P48444 511 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 CACNG1Q06432 222 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 ITIH4Q14624 930 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 ZNF658BQ4V348 819 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 VWA5B1Q5TIE3 1220 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 RHBDD2Q6NTF9 364 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 TLDC1Q6P9B6 456 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 FBXO38Q6PIJ6 1188 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 SPESP1Q6UW49 350 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 FAM198BQ6UWH4 519 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 SERPINA9Q86WD7 417 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 TBC1D21Q8IYX1 336 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 ADGRF3Q8IZF5 1079 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 ZBTB2Q8N680 514 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 TM9SF4Q92544 642 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 KRT35Q92764 455 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 PPM1MQ96MI6 270 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 TTC1Q99614 292 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 APOL2Q9BQE5 337 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 AP1M1Q9BXS5 423 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 TSPY26PQ9H489 355 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 NLE1Q9NVX2 485 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 GPN3Q9UHW5 284 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 SRPK3Q9UPE1 567 aa17.25■□□□□ 0.35
SHKBP1-227ENST00000602011 CACNA1DQ01668 2161 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 ZNF185O15231 689 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 FTH1P02794 183 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 SOX8P57073 446 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 TMPRSS15P98073 1019 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 ZRANB3Q5FWF4 1079 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 LYPLAL1Q5VWZ2 237 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 LCN10Q6JVE6 187 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 IGFL3Q6UXB1 125 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 TAS2R42Q7RTR8 314 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 LILRA3Q8N6C8 439 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 CLEC1AQ8NC01 280 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 CDKN2AIPNLQ96HQ2 116 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 GOLPH3Q9H4A6 298 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 LRRC40Q9H9A6 602 aa17.24■□□□□ 0.35
SHKBP1-227ENST00000602011 CREBBPQ92793 2442 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 MACROD2A1Z1Q3 448 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 BTNL10A8MVZ5 291 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 OR2B3O76000 313 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 PSMA3P25788 255 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 COL8A1P27658 744 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 MARCKSL1P49006 195 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 LMAN1P49257 510 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 DCDP81605 110 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 P3H1Q32P28 736 aa17.23■□□□□ 0.35
SHKBP1-227ENST00000602011 PRAMEF17Q5VTA0 474 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms