RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 GFM1Q96RP9 751 aaKnown RBP13.37□□□□□ -0.27
VRK3-219ENST00000600137 SCNM1Q9BWG6 230 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 CCDC68Q9H2F9 335 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 SEMA6CQ9H3T2 930 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 TFB2MQ9H5Q4 396 aaKnown RBP13.37□□□□□ -0.27
VRK3-219ENST00000600137 RRAGDQ9NQL2 400 aaPredicted RBP13.37□□□□□ -0.27
VRK3-219ENST00000600137 TAS2R13Q9NYV9 303 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.37□□□□□ -0.27
VRK3-219ENST00000600137 CLCA2Q9UQC9 943 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 RUVBL2Q9Y230 463 aaKnown RBP13.37□□□□□ -0.27
VRK3-219ENST00000600137 ASF1AQ9Y294 204 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 ENTPD2Q9Y5L3 495 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 HEBP2Q9Y5Z4 205 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 COLEC10Q9Y6Z7 277 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 V9GYY5 206 aaPredicted RBP13.37□□□□□ -0.27
VRK3-219ENST00000600137 FRYQ5TBA9 3013 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 FAM95CA0A1B0GW59 222 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 E5RI56 91 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 GFYI3L273 518 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 RIPK2O43353 540 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 VPS26AO75436 327 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 PSIP1O75475 530 aaKnown RBP13.36□□□□□ -0.27
VRK3-219ENST00000600137 UBXN7O94888 489 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 C1orf105O95561 183 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 C9P02748 559 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 PROS1P07225 676 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 TYRP1P17643 537 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 MCM3P25205 808 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 NDUFS1P28331 727 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 GCAP28676 217 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 GP5P40197 560 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 LIMK2P53671 638 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 SHC2P98077 582 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 NAB1Q13506 487 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 SPIDRQ14159 915 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 TMED2Q15363 201 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 CLPPQ16740 277 aaPredicted RBP13.36□□□□□ -0.27
VRK3-219ENST00000600137 GRTP1Q5TC63 336 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 FAM45BPQ6NSW5 357 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 WDR93Q6P2C0 686 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 TMEM71Q6P5X7 295 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 WDR74Q6RFH5 385 aaPredicted RBP13.36□□□□□ -0.27
VRK3-219ENST00000600137 UNC5DQ6UXZ4 953 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 TRMT10CQ7L0Y3 403 aaKnown RBP13.36□□□□□ -0.27
VRK3-219ENST00000600137 GPATCH11Q8N954 259 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 FAM45AQ8TCE6 357 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 ASB11Q8WXH4 323 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 CDKL2Q92772 493 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 DLG3Q92796 817 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 CYTH2Q99418 400 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 GPR22Q99680 433 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 RAB33BQ9H082 229 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 STN1Q9H668 368 aaKnown RBP13.36□□□□□ -0.27
VRK3-219ENST00000600137 EPHA6Q9UF33 1036 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 IKZF3Q9UKT9 509 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 ICKQ9UPZ9 632 aa13.36□□□□□ -0.27
VRK3-219ENST00000600137 ASPMQ8IZT6 3477 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 IGHV5-10-1A0A0J9YXX1 117 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 KRT87PA6NCN2 255 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 EIF3FO00303 357 aaPredicted RBP13.35□□□□□ -0.27
VRK3-219ENST00000600137 BTN3A3O00478 584 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 CSO75390 466 aaKnown RBP13.35□□□□□ -0.27
VRK3-219ENST00000600137 ABHD2P08910 425 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 MPC1LP0DKB6 136 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 CBSLP0DN79 551 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 JUPP14923 745 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 CCKBRP32239 447 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 CBSP35520 551 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 PMS2P54278 862 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 GFERP55789 205 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 PPP1CAP62136 330 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 BIRC2Q13490 618 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 UAP1Q16222 522 aaPredicted RBP13.35□□□□□ -0.27
VRK3-219ENST00000600137 RBM44Q6ZP01 1051 aaKnown RBP13.35□□□□□ -0.27
VRK3-219ENST00000600137 PIWIL4Q7Z3Z4 852 aaKnown RBP13.35□□□□□ -0.27
VRK3-219ENST00000600137 ARHGAP22Q7Z5H3 698 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 CTAGE3PQ8IX95 158 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 ADGRF3Q8IZF5 1079 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 GALNT15Q8N3T1 639 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 LMNTD1Q8N9Z9 388 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 OR4E2Q8NGC2 313 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 OR4D9Q8NGE8 314 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 OR10G6Q8NH81 332 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 CFAP61Q8NHU2 1237 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 FLVCR1-AS1Q8TAF5 88 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 UHMK1Q8TAS1 419 aaKnown RBP13.35□□□□□ -0.27
VRK3-219ENST00000600137 ANKRD49Q8WVL7 239 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 SLC44A1Q8WWI5 657 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.35□□□□□ -0.27
VRK3-219ENST00000600137 NCSTNQ92542 709 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 PDLIM5Q96HC4 596 aaKnown RBP13.35□□□□□ -0.27
VRK3-219ENST00000600137 HGH1Q9BTY7 390 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 DHRS4Q9BTZ2 278 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 TMEM121BQ9BXQ6 578 aaPredicted RBP13.35□□□□□ -0.27
VRK3-219ENST00000600137 TRIT1Q9H3H1 467 aaKnown RBP13.35□□□□□ -0.27
VRK3-219ENST00000600137 EPB41L1Q9H4G0 881 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 XKR8Q9H6D3 395 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 CAB39LQ9H9S4 337 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 SEMA5BQ9P283 1151 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 NEUROG3Q9Y4Z2 214 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms