RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 RASGRP3Q8IV61 690 aa27.34■■□□□ 1.97
ZNF558-206ENST00000599938 TBC1D21Q8IYX1 336 aa27.34■■□□□ 1.97
ZNF558-206ENST00000599938 NLGN4XQ8N0W4 816 aa27.34■■□□□ 1.97
ZNF558-206ENST00000599938 CARFQ8N187 725 aa27.34■■□□□ 1.97
ZNF558-206ENST00000599938 NLGN4YQ8NFZ3 816 aaPredicted RBP27.34■■□□□ 1.97
ZNF558-206ENST00000599938 OR5K2Q8NHB8 316 aa27.34■■□□□ 1.97
ZNF558-206ENST00000599938 PPM1MQ96MI6 270 aa27.34■■□□□ 1.97
ZNF558-206ENST00000599938 IL1RAPL1Q9NZN1 696 aa27.34■■□□□ 1.97
ZNF558-206ENST00000599938 ICKQ9UPZ9 632 aa27.34■■□□□ 1.97
ZNF558-206ENST00000599938 TDRKHQ9Y2W6 561 aaKnown RBP27.34■■□□□ 1.97
ZNF558-206ENST00000599938 MAD1L1Q9Y6D9 718 aa27.34■■□□□ 1.97
ZNF558-206ENST00000599938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.34■■□□□ 1.97
ZNF558-206ENST00000599938 RPS6KL1Q9Y6S9 549 aa27.34■■□□□ 1.97
ZNF558-206ENST00000599938 MAGEB16A2A368 324 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 BTN3A3O00478 584 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 ZBTB11O95625 1053 aaPredicted RBP27.33■■□□□ 1.97
ZNF558-206ENST00000599938 EBLN1P0CF75 366 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 OGNP20774 298 aaKnown RBP27.33■■□□□ 1.97
ZNF558-206ENST00000599938 CDH3P22223 829 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 HSD11B2P80365 405 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 ANKRD20A4Q4UJ75 823 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 DNAJC21Q5F1R6 531 aaKnown RBP27.33■■□□□ 1.97
ZNF558-206ENST00000599938 VRK3Q8IV63 474 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 KLHL7Q8IXQ5 586 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 LPGAT1Q92604 370 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 RNF31Q96EP0 1072 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 BBC3Q96PG8 261 aaPredicted RBP27.33■■□□□ 1.97
ZNF558-206ENST00000599938 SPRY4Q9C004 299 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 SOHLH2Q9NX45 425 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 POLG2Q9UHN1 485 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 CDYLQ9Y232 598 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 PCDHGA4Q9Y5G9 962 aa27.33■■□□□ 1.97
ZNF558-206ENST00000599938 DNALI1O14645 258 aaPredicted RBP27.32■■□□□ 1.96
ZNF558-206ENST00000599938 GPC4O75487 556 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 DLGAP3O95886 979 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 FGF5P12034 268 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 FOLR1P15328 257 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 AOAHP28039 575 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 SHMT2P34897 504 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 RHDQ02161 417 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 ACY1Q03154 408 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 SOWAHCQ53LP3 525 aaPredicted RBP27.32■■□□□ 1.96
ZNF558-206ENST00000599938 CTSL3PQ5NE16 218 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 KIAA1614Q5VZ46 1190 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 ZNF470Q6ECI4 717 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 NEPROQ6NW34 567 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 FBXO38Q6PIJ6 1188 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 PPP1R3BQ86XI6 285 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 ZSCAN1Q8NBB4 408 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 RUNDC3BQ96NL0 473 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 TCF12Q99081 682 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 PDE7BQ9NP56 450 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 RARRES3Q9UL19 164 aa27.32■■□□□ 1.96
ZNF558-206ENST00000599938 ZNF28P17035 718 aa27.31■■□□□ 1.96
ZNF558-206ENST00000599938 WT1P19544 449 aaPredicted RBP27.31■■□□□ 1.96
ZNF558-206ENST00000599938 MAP4P27816 1152 aaKnown RBP27.31■■□□□ 1.96
ZNF558-206ENST00000599938 PTGIRP43119 386 aa27.31■■□□□ 1.96
ZNF558-206ENST00000599938 THOC5Q13769 683 aaKnown RBP27.31■■□□□ 1.96
ZNF558-206ENST00000599938 OTOAQ7RTW8 1153 aa27.31■■□□□ 1.96
ZNF558-206ENST00000599938 TIPARPQ7Z3E1 657 aaKnown RBP27.31■■□□□ 1.96
ZNF558-206ENST00000599938 TMEM135Q86UB9 458 aa27.31■■□□□ 1.96
ZNF558-206ENST00000599938 CILP2Q8IUL8 1156 aa27.31■■□□□ 1.96
ZNF558-206ENST00000599938 AGGF1Q8N302 714 aaeCLIP27.31■■□□□ 1.96
ZNF558-206ENST00000599938 D2HGDHQ8N465 521 aa27.31■■□□□ 1.96
ZNF558-206ENST00000599938 GSDMBQ8TAX9 411 aa27.31■■□□□ 1.96
ZNF558-206ENST00000599938 C1GALT1Q9NS00 363 aa27.31■■□□□ 1.96
ZNF558-206ENST00000599938 LNPEPQ9UIQ6 1025 aa27.31■■□□□ 1.96
ZNF558-206ENST00000599938 C2orf74A8MZ97 194 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 FANCGO15287 622 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 KDM1AO60341 852 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 RPN2P04844 631 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 LIFP15018 202 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 PRDX3P30048 256 aaKnown RBP27.3■■□□□ 1.96
ZNF558-206ENST00000599938 FMO4P31512 558 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 PAFAH1B1P43034 410 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 LARP7Q4G0J3 582 aaKnown RBP eCLIP27.3■■□□□ 1.96
ZNF558-206ENST00000599938 IZUMO3Q5VZ72 239 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 SYDE1Q6ZW31 735 aaPredicted RBP27.3■■□□□ 1.96
ZNF558-206ENST00000599938 PCGF5Q86SE9 256 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 HOOK3Q86VS8 718 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 ADGRF3Q8IZF5 1079 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 ESX1Q8N693 406 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 CFAP61Q8NHU2 1237 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 STAMBPL1Q96FJ0 436 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 FGF21Q9NSA1 209 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 ACTR10Q9NZ32 417 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 PLAGL1Q9UM63 463 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 BTRCQ9Y297 605 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 VPS9D1Q9Y2B5 631 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 CRYL1Q9Y2S2 319 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 ATRXP46100 2492 aa27.3■■□□□ 1.96
ZNF558-206ENST00000599938 KALRNO60229 2985 aa27.29■■□□□ 1.96
ZNF558-206ENST00000599938 ZCWPW2A0A1B0GU75 182 aa27.29■■□□□ 1.96
ZNF558-206ENST00000599938 SLC9B1P1A6NJY1 282 aa27.29■■□□□ 1.96
ZNF558-206ENST00000599938 ERVH48-1M5A8F1 160 aa27.29■■□□□ 1.96
ZNF558-206ENST00000599938 KPNA5O15131 536 aa27.29■■□□□ 1.96
ZNF558-206ENST00000599938 SPAG6O75602 509 aa27.29■■□□□ 1.96
ZNF558-206ENST00000599938 USP1O94782 785 aa27.29■■□□□ 1.96
ZNF558-206ENST00000599938 KIAA0754O94854 1291 aa27.29■■□□□ 1.96
ZNF558-206ENST00000599938 SLCO2B1O94956 709 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms