RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 SLC16A5O15375 505 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 PSIP1O75475 530 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 KRT37O76014 449 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 UBXN7O94888 489 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 RPLP0P05388 317 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 C8GP07360 202 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 CD1CP29017 333 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 SHMT2P34897 504 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 HSD17B2P37059 387 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 TAS2R39P59534 338 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 SP140Q13342 867 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 USP10Q14694 798 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 PLCL1Q15111 1095 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 ZKSCAN8Q15776 578 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 ACSBG2Q5FVE4 666 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 CDCP2Q5VXM1 449 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 PAQR3Q6TCH7 311 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 NAPRTQ6XQN6 538 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 RBM44Q6ZP01 1051 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 RAB44Q7Z6P3 723 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 PIM3Q86V86 326 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 PLXDC1Q8IUK5 500 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 CARFQ8N187 725 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 MYO1HQ8N1T3 1032 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 ASB11Q8WXH4 323 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 ATXN7L3BQ96GX2 97 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 PAFAH2Q99487 392 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 OR6C2Q9NZP2 312 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 GALPQ9UBC7 116 aa16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 MTO1Q9Y2Z2 717 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 CFAP20Q9Y6A4 193 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 V9GYY5 206 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 GOLGA4Q13439 2230 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-219ENST00000599575 CACNA1AO00555 2505 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 GFYI3L273 518 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 TOX3O15405 576 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 ZBTB14O43829 449 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 PROS1P07225 676 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 ZNF37AP17032 561 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 CAPZBP47756 277 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 OR1D5P58170 312 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 RAB10P61026 200 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 INSM1Q01101 510 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 ABRQ12979 859 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 TRA2AQ13595 282 aaKnown RBP eCLIP16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 RASA2Q15283 850 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 CYHR1Q6ZMK1 362 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 RASGRP3Q8IV61 690 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 GSPT2Q8IYD1 628 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 CPNE9Q8IYJ1 553 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 MREGQ8N565 214 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 DCBLD1Q8N8Z6 715 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 Q8N9G6 341 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 OR4D9Q8NGE8 314 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 LCN9Q8WX39 176 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 FAM136AQ96C01 138 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 MTBPQ96DY7 904 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 TMEM74Q96NL1 305 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 DEPDC7Q96QD5 511 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 SLC30A3Q99726 388 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 OLFM1Q99784 485 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 DHRS4Q9BTZ2 278 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 GPAMQ9HCL2 828 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 PDP2Q9P2J9 529 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 SLC39A10Q9ULF5 831 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 ENTPD2Q9Y5L3 495 aa16.11■□□□□ 0.17
SHKBP1-219ENST00000599575 ARHGEF17Q96PE2 2063 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 ZFC3H1O60293 1989 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 A0A1W2PQM1 296 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 ZNF839A8K0R7 811 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 D6RAR5 112 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 ERLIN1O75477 346 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 PIAS1O75925 651 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 C1orf105O95561 183 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 F7P08709 466 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 ENO2P09104 434 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 AMD1P17707 334 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 MAP4P27816 1152 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 ABCG1P45844 678 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 RAB28P51157 221 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 CCL7P80098 99 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 ARHGAP19Q14CB8 494 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 N4BP2L1Q5TBK1 243 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 TMEM71Q6P5X7 295 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 ADGRD1Q6QNK2 874 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 DHRS13Q6UX07 377 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 TMPRSS7Q7RTY8 843 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 AMIGO1Q86WK6 493 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 OOSP2Q86WS3 158 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 OR52E1Q8NGJ3 308 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 OR5AR1Q8NGP9 310 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 EEF1AKMT1Q8WVE0 214 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 UBLCP1Q8WVY7 318 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 ZDHHC12Q96GR4 267 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 CD180Q99467 661 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 SLC12A9Q9BXP2 914 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 EPB41L4BQ9H329 900 aa16.1■□□□□ 0.17
SHKBP1-219ENST00000599575 SRMSQ9H3Y6 488 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms