RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 MAP3K7O43318 606 aa18.19■□□□□ 0.5
PNKP-213ENST00000599543 KLK3P07288 261 aaPredicted RBP18.19■□□□□ 0.5
PNKP-213ENST00000599543 TPH1P17752 444 aa18.19■□□□□ 0.5
PNKP-213ENST00000599543 NR1D1P20393 614 aa18.19■□□□□ 0.5
PNKP-213ENST00000599543 RPL22P35268 128 aaKnown RBP18.19■□□□□ 0.5
PNKP-213ENST00000599543 VPS41P49754 854 aa18.19■□□□□ 0.5
PNKP-213ENST00000599543 RPS18P62269 152 aaKnown RBP18.19■□□□□ 0.5
PNKP-213ENST00000599543 CACNG1Q06432 222 aa18.19■□□□□ 0.5
PNKP-213ENST00000599543 SYVN1Q86TM6 617 aa18.19■□□□□ 0.5
PNKP-213ENST00000599543 CCDC89Q8N998 374 aa18.19■□□□□ 0.5
PNKP-213ENST00000599543 CPT1BQ92523 772 aa18.19■□□□□ 0.5
PNKP-213ENST00000599543 MAGOHBQ96A72 148 aaKnown RBP18.19■□□□□ 0.5
PNKP-213ENST00000599543 RUFY1Q96T51 708 aa18.19■□□□□ 0.5
PNKP-213ENST00000599543 ETNK1Q9HBU6 452 aa18.19■□□□□ 0.5
PNKP-213ENST00000599543 LATS2Q9NRM7 1088 aa18.19■□□□□ 0.5
PNKP-213ENST00000599543 TLK1Q9UKI8 766 aa18.19■□□□□ 0.5
PNKP-213ENST00000599543 TNRC6AQ8NDV7 1962 aaKnown RBP18.19■□□□□ 0.5
PNKP-213ENST00000599543 CTAGE9A4FU28 777 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 AP2A1O95782 977 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 GSTM1P09488 218 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 PRSS56P0CW18 603 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 STIP1P31948 543 aaKnown RBP18.18■□□□□ 0.5
PNKP-213ENST00000599543 PREPP48147 710 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 CD151P48509 253 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 FOXK1P85037 733 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 GSTM4Q03013 218 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 RPA4Q13156 261 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 GPS2Q13227 327 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 UGT8Q16880 541 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 ASB18Q6ZVZ8 466 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 APLFQ8IW19 511 aaPredicted RBP18.18■□□□□ 0.5
PNKP-213ENST00000599543 CLDN19Q8N6F1 224 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 TEX19Q8NA77 164 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 OR52E1Q8NGJ3 308 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 STYXQ8WUJ0 223 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 THAP4Q8WY91 577 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 CDKN2AIPNLQ96HQ2 116 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 TFB2MQ9H5Q4 396 aaKnown RBP18.18■□□□□ 0.5
PNKP-213ENST00000599543 MVB12BQ9H7P6 319 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 SYTL2Q9HCH5 934 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 RAB6BQ9NRW1 208 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 MED13Q9UHV7 2174 aa18.18■□□□□ 0.5
PNKP-213ENST00000599543 TMEM150CB9EJG8 249 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 BTN3A1O00481 513 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 PSMD3O43242 534 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 DNAJB5O75953 348 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 AP2A2O94973 939 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 PDHA2P29803 388 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 PRDX3P30048 256 aaKnown RBP18.17■□□□□ 0.5
PNKP-213ENST00000599543 SEMA5AQ13591 1074 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 IGFBP7Q16270 282 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 DBN1Q16643 649 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 ZNF658BQ4V348 819 aaPredicted RBP18.17■□□□□ 0.5
PNKP-213ENST00000599543 COLEC12Q5KU26 742 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 IZUMO3Q5VZ72 239 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 PAPD7Q5XG87 772 aaKnown RBP18.17■□□□□ 0.5
PNKP-213ENST00000599543 DRICH1Q6PGQ1 229 aaPredicted RBP18.17■□□□□ 0.5
PNKP-213ENST00000599543 SYT10Q6XYQ8 523 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 ZNF517Q6ZMY9 492 aaPredicted RBP18.17■□□□□ 0.5
PNKP-213ENST00000599543 LINC00523Q86TU6 105 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 AMIGO1Q86WK6 493 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 PIANPQ8IYJ0 282 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 SLC38A9Q8NBW4 561 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 PHC3Q8NDX5 983 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 ACTRT1Q8TDG2 376 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 CLIP3Q96DZ5 547 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 LRFN5Q96NI6 719 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 HGH1Q9BTY7 390 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 TTC7AQ9ULT0 858 aaPredicted RBP18.17■□□□□ 0.5
PNKP-213ENST00000599543 FARSAQ9Y285 508 aaKnown RBP18.17■□□□□ 0.5
PNKP-213ENST00000599543 DRG1Q9Y295 367 aaKnown RBP18.17■□□□□ 0.5
PNKP-213ENST00000599543 ZKSCAN5Q9Y2L8 839 aa18.17■□□□□ 0.5
PNKP-213ENST00000599543 SNRNP200O75643 2136 aaKnown RBP18.16■□□□□ 0.5
PNKP-213ENST00000599543 CCDC78A2IDD5 438 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 C2orf74A8MZ97 194 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 K7EM74 188 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 QSOX1O00391 747 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 BTN3A3O00478 584 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 ST6GAL1P15907 406 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 TCP1P17987 556 aaKnown RBP18.16■□□□□ 0.5
PNKP-213ENST00000599543 CYP2A7P20853 494 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 GRIA1P42261 906 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 NSG1P42857 185 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 LMAN1P49257 510 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 ABRQ12979 859 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 PRKG2Q13237 762 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 IL10RAQ13651 578 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 PRAMEF17Q5VTA0 474 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 TFGQ92734 400 aaPredicted RBP18.16■□□□□ 0.5
PNKP-213ENST00000599543 PITPNM3Q9BZ71 974 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 SLC7A5P2Q9GIP4 190 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 CHST8Q9H2A9 424 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 SNX7Q9UNH6 387 aa18.16■□□□□ 0.5
PNKP-213ENST00000599543 MROH6A6NGR9 719 aa18.15■□□□□ 0.5
PNKP-213ENST00000599543 MEN1O00255 615 aa18.15■□□□□ 0.5
PNKP-213ENST00000599543 LIN7AO14910 233 aaPredicted RBP18.15■□□□□ 0.5
PNKP-213ENST00000599543 GAS8O95995 478 aa18.15■□□□□ 0.5
PNKP-213ENST00000599543 FTH1P02794 183 aa18.15■□□□□ 0.5
PNKP-213ENST00000599543 MSL3P1P0C860 447 aa18.15■□□□□ 0.5
PNKP-213ENST00000599543 COILP38432 576 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms