RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 CD180Q99467 661 aa13.47□□□□□ -0.25
UPF1-205ENST00000598209 ERP44Q9BS26 406 aa13.47□□□□□ -0.25
UPF1-205ENST00000598209 FAM167BQ9BTA0 163 aa13.47□□□□□ -0.25
UPF1-205ENST00000598209 B3GNT4Q9C0J1 378 aa13.47□□□□□ -0.25
UPF1-205ENST00000598209 DPH5Q9H2P9 285 aa13.47□□□□□ -0.25
UPF1-205ENST00000598209 SRMSQ9H3Y6 488 aa13.47□□□□□ -0.25
UPF1-205ENST00000598209 ZNF768Q9H5H4 540 aaKnown RBP13.47□□□□□ -0.25
UPF1-205ENST00000598209 TFB2MQ9H5Q4 396 aaKnown RBP13.47□□□□□ -0.25
UPF1-205ENST00000598209 FOXJ2Q9P0K8 574 aa13.47□□□□□ -0.25
UPF1-205ENST00000598209 FBXO5Q9UKT4 447 aa13.47□□□□□ -0.25
UPF1-205ENST00000598209 CHMP2BQ9UQN3 213 aa13.47□□□□□ -0.25
UPF1-205ENST00000598209 AHCTF1Q8WYP5 2266 aa13.47□□□□□ -0.25
UPF1-205ENST00000598209 TLCD2A6NGC4 264 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 ERVK-10P10266 1014 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 ABCG1P45844 678 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 RAB15P59190 212 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 MPP1Q00013 466 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 MC2RQ01718 297 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 ABRQ12979 859 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 PRKAA1Q13131 559 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 CALCOCO2Q13137 446 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 DNTTIP2Q5QJE6 756 aaKnown RBP13.46□□□□□ -0.25
UPF1-205ENST00000598209 PLEKHS1Q5SXH7 462 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 ANKS6Q68DC2 871 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 C19orf48Q6RUI8 117 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 AMIGO1Q86WK6 493 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 OR5K2Q8NHB8 316 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 CFAP61Q8NHU2 1237 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 GSDMBQ8TAX9 411 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 KLHL6Q8WZ60 621 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 UBXN4Q92575 508 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 FAM136AQ96C01 138 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 LRRC39Q96DD0 335 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 CFAP36Q96G28 342 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 NRTNQ99748 197 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 MAP3K3Q99759 626 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 WDR83Q9BRX9 315 aaKnown RBP13.46□□□□□ -0.25
UPF1-205ENST00000598209 DDA1Q9BW61 102 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 XKR8Q9H6D3 395 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 IARS2Q9NSE4 1012 aaKnown RBP13.46□□□□□ -0.25
UPF1-205ENST00000598209 SIDT1Q9NXL6 827 aaKnown RBP13.46□□□□□ -0.25
UPF1-205ENST00000598209 SEMA5BQ9P283 1151 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 ZC3H7BQ9UGR2 993 aaKnown RBP13.46□□□□□ -0.25
UPF1-205ENST00000598209 POLG2Q9UHN1 485 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 ACSL6Q9UKU0 697 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 TDRKHQ9Y2W6 561 aaKnown RBP13.46□□□□□ -0.25
UPF1-205ENST00000598209 PCDHGA3Q9Y5H0 932 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 B3GALT1Q9Y5Z6 326 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 TEX264Q9Y6I9 313 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 CELSR3Q9NYQ7 3312 aa13.46□□□□□ -0.25
UPF1-205ENST00000598209 PKD1L2Q7Z442 2459 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 IGHV5-51A0A0C4DH38 117 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 GSAPA4D1B5 854 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 E5RI56 91 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 MATN2O00339 956 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 BTN3A3O00478 584 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 BTN3A1O00481 513 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 KLK10O43240 276 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 KRT37O76014 449 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 CHRM3P20309 590 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 CD82P27701 267 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 KPNA2P52292 529 aaKnown RBP13.45□□□□□ -0.26
UPF1-205ENST00000598209 PDIA2Q13087 525 aaKnown RBP13.45□□□□□ -0.26
UPF1-205ENST00000598209 DCAF12Q5T6F0 453 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 DUPD1Q68J44 220 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 UNC5DQ6UXZ4 953 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 UNC5AQ6ZN44 842 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 ZFAND4Q86XD8 727 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 GABPB2Q8TAK5 448 aaPredicted RBP13.45□□□□□ -0.26
UPF1-205ENST00000598209 CERS2Q96G23 380 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 CTRCQ99895 268 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 ASPSCR1Q9BZE9 553 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 DPH1Q9BZG8 443 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 CCDC68Q9H2F9 335 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 PLAC1Q9HBJ0 212 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 APMAPQ9HDC9 416 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 FBXO8Q9NRD0 319 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 WHRNQ9P202 907 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 POMT2Q9UKY4 750 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 ICKQ9UPZ9 632 aa13.45□□□□□ -0.26
UPF1-205ENST00000598209 UTP11Q9Y3A2 253 aaKnown RBP13.45□□□□□ -0.26
UPF1-205ENST00000598209 E7ESA3 106 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 HAUS5O94927 633 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 TUBB4AP04350 444 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 RPN2P04844 631 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 TPBGLP0DKB5 382 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 NELFEP18615 380 aaKnown RBP13.44□□□□□ -0.26
UPF1-205ENST00000598209 SHMT2P34897 504 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 SH3BP2P78314 561 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 TLE3Q04726 772 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 FOXM1Q08050 763 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 CLN3Q13286 438 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 GBX1Q14549 363 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 FASTKD3Q14CZ7 662 aaKnown RBP13.44□□□□□ -0.26
UPF1-205ENST00000598209 WHAMMP3Q1A5X7 153 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 COL28A1Q2UY09 1125 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 STEAP4Q687X5 459 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 ZNF549Q6P9A3 640 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 CNSTQ6PJW8 725 aa13.44□□□□□ -0.26
UPF1-205ENST00000598209 CEACAM20Q6UY09 585 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms