RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 OR13C4Q8NGS5 318 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 OR2Y1Q8NGV0 311 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 UBE2Q2Q8WVN8 375 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 DCUN1D1Q96GG9 259 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 RBM41Q96IZ5 413 aaKnown RBP9.64□□□□□ -0.87
LIG1-209ENST00000596104 DNAJC7Q99615 494 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 COPS8Q99627 209 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 C17orf62Q9BQA9 187 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 FICDQ9BVA6 458 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 ILKAPQ9H0C8 392 aaPredicted RBP9.64□□□□□ -0.87
LIG1-209ENST00000596104 GBA3Q9H227 469 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 XKR8Q9H6D3 395 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 MVB12BQ9H7P6 319 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 P4HTMQ9NXG6 502 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 IFNKQ9P0W0 207 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 RSPH14Q9UHP6 348 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 CRLS1Q9UJA2 301 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 TRHDEQ9UKU6 1024 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 PTRH2Q9Y3E5 179 aaKnown RBP9.64□□□□□ -0.87
LIG1-209ENST00000596104 COPG1Q9Y678 874 aaKnown RBP9.64□□□□□ -0.87
LIG1-209ENST00000596104 AP1M2Q9Y6Q5 423 aa9.64□□□□□ -0.87
LIG1-209ENST00000596104 hCG_1818297A0A087WSY0 165 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 C2orf81A6NN90 581 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 HACD1B0YJ81 288 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 IFRD1O00458 451 aaPredicted RBP9.63□□□□□ -0.87
LIG1-209ENST00000596104 PEX12O00623 359 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 E2F3O00716 465 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 MAP3K7O43318 606 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 AKR1B10O60218 316 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 KLHL41O60662 606 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 OR2B3O76000 313 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 CTSBP07858 339 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 UMODP07911 640 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 RALBP11234 206 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 SPTBP11277 2137 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 ATP1B2P14415 290 aaPredicted RBP9.63□□□□□ -0.87
LIG1-209ENST00000596104 FOLR3P41439 243 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 ZNF140P52738 457 aaPredicted RBP9.63□□□□□ -0.87
LIG1-209ENST00000596104 GEMP55040 296 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 TPM4P67936 248 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 PRKG2Q13237 762 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 DEFB110Q30KQ9 67 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 ODF2Q5BJF6 829 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 MRPL14Q6P1L8 145 aaKnown RBP9.63□□□□□ -0.87
LIG1-209ENST00000596104 SPESP1Q6UW49 350 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 MICALCLQ6ZW33 695 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 TRIM73Q86UV7 250 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 GPR135Q8IZ08 494 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 ZADH2Q8N4Q0 377 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 C19orf47Q8N9M1 422 aaKnown RBP9.63□□□□□ -0.87
LIG1-209ENST00000596104 ST6GALNAC3Q8NDV1 305 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 OR8K1Q8NGG5 319 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 FLVCR1-AS1Q8TAF5 88 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 PROKR1Q8TCW9 393 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 TM9SF4Q92544 642 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 TFGQ92734 400 aaPredicted RBP9.63□□□□□ -0.87
LIG1-209ENST00000596104 P3H4Q92791 437 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 ULK4Q96C45 1275 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 HAUS1Q96CS2 278 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 CHP1Q99653 195 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 C19orf43Q9BQ61 176 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 APOL2Q9BQE5 337 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 HGH1Q9BTY7 390 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 CHRNA10Q9GZZ6 450 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 SPRTNQ9H040 489 aaPredicted RBP9.63□□□□□ -0.87
LIG1-209ENST00000596104 DEF6Q9H4E7 631 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 FAM96AQ9H5X1 160 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 SLC22A11Q9NSA0 550 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 SPTLC3Q9NUV7 552 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 IFT80Q9P2H3 777 aaPredicted RBP9.63□□□□□ -0.87
LIG1-209ENST00000596104 DHCR7Q9UBM7 475 aaKnown RBP9.63□□□□□ -0.87
LIG1-209ENST00000596104 ICKQ9UPZ9 632 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 CDYLQ9Y232 598 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 CSAG2Q9Y5P2 127 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 SEC16AO15027 2179 aa9.63□□□□□ -0.87
LIG1-209ENST00000596104 TRBV5-4A0A0C4DH59 114 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 CFAP99D6REC4 459 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 CCL22O00626 93 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 ZSCAN9O15535 394 aaPredicted RBP9.62□□□□□ -0.87
LIG1-209ENST00000596104 PSTPIP1O43586 416 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 SPOPO43791 374 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 ANXA9O76027 345 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 CD63P08962 238 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 UGT2B7P16662 529 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 ITGALP20701 1170 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 RBL1P28749 1068 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 GCGRP47871 477 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 GLRBP48167 497 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 CDKN1CP49918 316 aaPredicted RBP9.62□□□□□ -0.87
LIG1-209ENST00000596104 DCDP81605 110 aaKnown RBP9.62□□□□□ -0.87
LIG1-209ENST00000596104 RPA4Q13156 261 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 ELOAQ14241 798 aaKnown RBP9.62□□□□□ -0.87
LIG1-209ENST00000596104 NKAIN1Q4KMZ8 207 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 TFDP3Q5H9I0 405 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 DENND5AQ6IQ26 1287 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 SNX20Q7Z614 316 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 KCNMB4Q86W47 210 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 SRRM1Q8IYB3 904 aaKnown RBP9.62□□□□□ -0.87
LIG1-209ENST00000596104 SLC34A3Q8N130 599 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 HEXDCQ8WVB3 486 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms