RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 IFT88Q13099 833 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 ABI3BPQ7Z7G0 1075 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 PDZD3Q86UT5 571 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 GALNT13Q8IUC8 556 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 FBXO15Q8NCQ5 510 aaPredicted RBP20.3■□□□□ 0.84
PNKP-203ENST00000593946 OR56A4Q8NGH8 313 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 AGAP11Q8TF27 550 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 WDR92Q96MX6 357 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 EBF4Q9BQW3 602 aa20.3■□□□□ 0.84
PNKP-203ENST00000593946 MRPL40Q9NQ50 206 aaKnown RBP20.3■□□□□ 0.84
PNKP-203ENST00000593946 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.3■□□□□ 0.84
PNKP-203ENST00000593946 GON4LQ3T8J9 2241 aa20.29■□□□□ 0.84
PNKP-203ENST00000593946 PRR19A6NJB7 356 aa20.29■□□□□ 0.84
PNKP-203ENST00000593946 KELP23276 732 aa20.29■□□□□ 0.84
PNKP-203ENST00000593946 MAP4P27816 1152 aaKnown RBP20.29■□□□□ 0.84
PNKP-203ENST00000593946 TPRG1LQ5T0D9 272 aa20.29■□□□□ 0.84
PNKP-203ENST00000593946 CHST15Q7LFX5 561 aaPredicted RBP20.29■□□□□ 0.84
PNKP-203ENST00000593946 TRPM8Q7Z2W7 1104 aa20.29■□□□□ 0.84
PNKP-203ENST00000593946 MAPK15Q8TD08 544 aa20.29■□□□□ 0.84
PNKP-203ENST00000593946 FAR2Q96K12 515 aa20.29■□□□□ 0.84
PNKP-203ENST00000593946 UHRF1Q96T88 793 aaPredicted RBP20.29■□□□□ 0.84
PNKP-203ENST00000593946 HGH1Q9BTY7 390 aa20.29■□□□□ 0.84
PNKP-203ENST00000593946 MID1IP1Q9NPA3 183 aa20.29■□□□□ 0.84
PNKP-203ENST00000593946 ABCF3Q9NUQ8 709 aa20.29■□□□□ 0.84
PNKP-203ENST00000593946 KRT87PA6NCN2 255 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 CCT8L1PA6NM43 557 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 K7ESF4 209 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 DCTN3O75935 186 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 C1orf105O95561 183 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 FGF4P08620 206 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 ACP5P13686 325 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 HTR1BP28222 390 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 CXCL12P48061 93 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 IDH3AP50213 366 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 GTF2H2Q13888 395 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 ZXDCQ2QGD7 858 aaPredicted RBP20.28■□□□□ 0.84
PNKP-203ENST00000593946 GTF2H2CQ6P1K8 395 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 TTC23LQ6PF05 361 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 EPGNQ6UW88 154 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 GOLGA7Q7Z5G4 137 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 FBXL8Q96CD0 374 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 ZNF382Q96SR6 550 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 ORAI3Q9BRQ5 295 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 ZDHHC5Q9C0B5 715 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 DLGAP2Q9P1A6 1054 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 TRAF6Q9Y4K3 522 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 ABCA7Q8IZY2 2146 aa20.28■□□□□ 0.84
PNKP-203ENST00000593946 A0A1B0GTL3 188 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 A0A1W2PPC4 97 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 TNFRSF10CO14798 259 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 KCNJ13O60928 360 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 STK16O75716 305 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 GDF5P43026 501 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 BDKRB1P46663 353 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 VWA5B1Q5TIE3 1220 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 CWF19L1Q69YN2 538 aaKnown RBP20.27■□□□□ 0.84
PNKP-203ENST00000593946 UNC5DQ6UXZ4 953 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 MAMSTRQ6ZN01 415 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 AFAP1L2Q8N4X5 818 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 SPDYE1Q8NFV5 336 aaPredicted RBP20.27■□□□□ 0.84
PNKP-203ENST00000593946 STON2Q8WXE9 905 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 OR1E3Q8WZA6 343 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 SKA1Q96BD8 255 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 PCED1AQ9H1Q7 454 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 KLC4Q9NSK0 619 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 OPTCQ9UBM4 332 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 HEY2Q9UBP5 337 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 MOSPD1Q9UJG1 213 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 ZNF225Q9UK10 706 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 ACSL5Q9ULC5 683 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 TECTAO75443 2155 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 FANCMQ8IYD8 2048 aa20.27■□□□□ 0.84
PNKP-203ENST00000593946 K7EPI3 171 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 CCNT2O60583 730 aaKnown RBP20.27■□□□□ 0.83
PNKP-203ENST00000593946 ESRRBO95718 433 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 JUNP05412 331 aaKnown RBP20.27■□□□□ 0.83
PNKP-203ENST00000593946 MAGEA9P43362 315 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 GNPDA1P46926 289 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 RABIFP47224 123 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 SLC6A12P48065 614 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 SIGLEC14Q08ET2 396 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 TUBB3Q13509 450 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 RBBP7Q16576 425 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 CCSMST1Q4G0I0 132 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 ENPP7Q6UWV6 458 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 FITM2Q8N6M3 262 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 TEX9Q8N6V9 391 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 CCT6BQ92526 530 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 PDXPQ96GD0 296 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 CCDC138Q96M89 665 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 LRRC37BQ96QE4 947 aa20.27■□□□□ 0.83
PNKP-203ENST00000593946 CARS2Q9HA77 564 aaKnown RBP20.27■□□□□ 0.83
PNKP-203ENST00000593946 DIAPH2O60879 1101 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 NDUFS2O75306 463 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 SERPINB3P29508 390 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 PRDX3P30048 256 aaKnown RBP20.26■□□□□ 0.83
PNKP-203ENST00000593946 THOP1P52888 689 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 PKNOX1P55347 436 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 UGT3A2Q3SY77 523 aa20.26■□□□□ 0.83
PNKP-203ENST00000593946 SLC9B1Q4ZJI4 515 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms