RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 KIAA0040Q15053 153 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 SMU1Q2TAY7 513 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 TTC23LQ6PF05 361 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 PPWD1Q96BP3 646 aaKnown RBP19.28■□□□□ 0.68
MBD3-209ENST00000592012 TSPAN11A1L157 253 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 LINC01553A4QN01 128 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 IFRD1O00458 451 aaPredicted RBP19.28■□□□□ 0.68
MBD3-209ENST00000592012 MAP3K13O43283 966 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 SGTAO43765 313 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 CLDN9O95484 217 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 DGKQP52824 942 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 EEFSECP57772 596 aaKnown RBP19.28■□□□□ 0.68
MBD3-209ENST00000592012 UBE3AQ05086 875 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 NRF1Q16656 503 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 PLEKHS1Q5SXH7 462 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 C6orf52Q5T4I8 152 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 FOXB2Q5VYV0 432 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 RGL4Q8IZJ4 473 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 SKA2Q8WVK7 121 aaPredicted RBP19.28■□□□□ 0.68
MBD3-209ENST00000592012 KCTD14Q9BQ13 255 aaPredicted RBP19.28■□□□□ 0.68
MBD3-209ENST00000592012 MUC13Q9H3R2 512 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 ZNHIT2Q9UHR6 403 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 PCDHGB4Q9UN71 923 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 PCDHGB5Q9Y5G0 923 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 C5orf42Q9H799 3197 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 C15orf38-AP3S2A0A0A6YYH1 394 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 C7orf72A4D263 438 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 UPK3BL1B0FP48 263 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 UPK3BL2E5RIL1 263 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 GFYI3L273 518 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 BMP2P12643 396 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 GNPDA1P46926 289 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 BOP1Q14137 746 aaKnown RBP19.27■□□□□ 0.68
MBD3-209ENST00000592012 INPP5AQ14642 412 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 PTGR1Q14914 329 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 DHCR24Q15392 516 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 SGO1Q5FBB7 561 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 ERMP1Q7Z2K6 904 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 ARPINQ7Z6K5 226 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 ZNF597Q96LX8 424 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 SLC29A1Q99808 456 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 IL36AQ9UHA7 158 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 AURKCQ9UQB9 309 aa19.27■□□□□ 0.68
MBD3-209ENST00000592012 EIF3LQ9Y262 564 aaKnown RBP19.27■□□□□ 0.68
MBD3-209ENST00000592012 SLC9A3R1O14745 358 aaPredicted RBP19.27■□□□□ 0.67
MBD3-209ENST00000592012 AKAP10O43572 662 aa19.27■□□□□ 0.67
MBD3-209ENST00000592012 CISD3P0C7P0 127 aa19.27■□□□□ 0.67
MBD3-209ENST00000592012 MPC1LP0DKB6 136 aa19.27■□□□□ 0.67
MBD3-209ENST00000592012 VARSP26640 1264 aaKnown RBP19.27■□□□□ 0.67
MBD3-209ENST00000592012 MAD2L1Q13257 205 aaPredicted RBP19.27■□□□□ 0.67
MBD3-209ENST00000592012 TBCELQ5QJ74 424 aa19.27■□□□□ 0.67
MBD3-209ENST00000592012 HENMT1Q5T8I9 393 aaKnown RBP19.27■□□□□ 0.67
MBD3-209ENST00000592012 SLC29A3Q9BZD2 475 aa19.27■□□□□ 0.67
MBD3-209ENST00000592012 PER2O15055 1255 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 HNRNPRO43390 633 aaKnown RBP19.26■□□□□ 0.67
MBD3-209ENST00000592012 HIST1H2AGP0C0S8 130 aaPredicted RBP19.26■□□□□ 0.67
MBD3-209ENST00000592012 MTHFD1P11586 935 aaKnown RBP19.26■□□□□ 0.67
MBD3-209ENST00000592012 HIST1H2ADP20671 130 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 FXNQ16595 210 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 CPSF6Q16630 551 aaKnown RBP eCLIP19.26■□□□□ 0.67
MBD3-209ENST00000592012 PRR23BQ6ZRT6 265 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 ADGRG5Q8IZF4 528 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 ST13P4Q8IZP2 240 aaPredicted RBP19.26■□□□□ 0.67
MBD3-209ENST00000592012 TCAIMQ8N3R3 496 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 DNAJC5GQ8N7S2 189 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 ANKFN1Q8N957 763 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 ZNF707Q96C28 371 aaPredicted RBP19.26■□□□□ 0.67
MBD3-209ENST00000592012 HIST1H2AHQ96KK5 128 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 CIB1Q99828 191 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 HIST1H2AJQ99878 128 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 P2RY13Q9BPV8 354 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 H2AFJQ9BTM1 129 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 RIOK2Q9BVS4 552 aaKnown RBP19.26■□□□□ 0.67
MBD3-209ENST00000592012 ACTR8Q9H981 624 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 PRKAG2Q9UGJ0 569 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 PLXNA2O75051 1894 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 IL10P22301 178 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 PSMA4P25789 261 aaKnown RBP19.26■□□□□ 0.67
MBD3-209ENST00000592012 OXTRP30559 389 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 SLC6A12P48065 614 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 HNMTP50135 292 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 GK3PQ14409 553 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 ZNF805Q5CZA5 627 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 LRRC70Q7Z2Q7 622 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 HOMEZQ8IX15 550 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 TRAM1L1Q8N609 369 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 PHOSPHO2Q8TCD6 241 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 CNBD2Q96M20 576 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 LRTM1Q9HBL6 345 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 ZFP14Q9HCL3 533 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 SLC8A2Q9UPR5 921 aa19.26■□□□□ 0.67
MBD3-209ENST00000592012 CROCCQ5TZA2 2017 aa19.25■□□□□ 0.67
MBD3-209ENST00000592012 FADS2P1A8MWK0 482 aa19.25■□□□□ 0.67
MBD3-209ENST00000592012 CFAP99D6REC4 459 aa19.25■□□□□ 0.67
MBD3-209ENST00000592012 ZNF197O14709 1029 aa19.25■□□□□ 0.67
MBD3-209ENST00000592012 KPNA5O15131 536 aa19.25■□□□□ 0.67
MBD3-209ENST00000592012 SEC22BO75396 215 aa19.25■□□□□ 0.67
MBD3-209ENST00000592012 HTR1EP28566 365 aa19.25■□□□□ 0.67
MBD3-209ENST00000592012 VASPP50552 380 aaPredicted RBP19.25■□□□□ 0.67
MBD3-209ENST00000592012 IMPG1Q17R60 797 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms