RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 PRR19A6NJB7 356 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 E2F3O00716 465 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 TAPBPO15533 448 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 HNMTP50135 292 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 RPL14P50914 215 aaKnown RBP17.02■□□□□ 0.32
CXXC1-212ENST00000589940 CDH13P55290 713 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 CLCQ05315 142 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 PTK2BQ14289 1009 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 C18orf21Q32NC0 220 aaPredicted RBP17.02■□□□□ 0.32
CXXC1-212ENST00000589940 METTL2BQ6P1Q9 378 aaKnown RBP17.02■□□□□ 0.32
CXXC1-212ENST00000589940 UNC5DQ6UXZ4 953 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 SLC22A18ASQ8N1D0 253 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 DEFB119Q8N690 84 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 FBXO15Q8NCQ5 510 aaPredicted RBP17.02■□□□□ 0.32
CXXC1-212ENST00000589940 RFWD2Q8NHY2 731 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 TMEM79Q9BSE2 394 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 SHCBP1LQ9BZQ2 653 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 PRMT8Q9NR22 394 aaPredicted RBP17.02■□□□□ 0.32
CXXC1-212ENST00000589940 GPR27Q9NS67 375 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 DCTN4Q9UJW0 460 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 KCNK6Q9Y257 313 aa17.02■□□□□ 0.32
CXXC1-212ENST00000589940 PLXND1Q9Y4D7 1925 aa17.02■□□□□ 0.31
CXXC1-212ENST00000589940 C1orf105O95561 183 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 LCP2Q13094 533 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 CUZD1Q86UP6 607 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 ANKS4BQ8N8V4 417 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 SPDYE1Q8NFV5 336 aaPredicted RBP17.01■□□□□ 0.31
CXXC1-212ENST00000589940 TSACCQ96A04 125 aaPredicted RBP17.01■□□□□ 0.31
CXXC1-212ENST00000589940 SLC6A18Q96N87 628 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 SIKE1Q9BRV8 207 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 ZDHHC5Q9C0B5 715 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 OSGEPL1Q9H4B0 414 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 AASDHPPTQ9NRN7 309 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 ZDHHC2Q9UIJ5 367 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 ARL2BPQ9Y2Y0 163 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 PLEKHM1Q9Y4G2 1056 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 SLCO1B1Q9Y6L6 691 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 A0A0G2JND7 137 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 TMEM221A6NGB7 291 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 M0R296 226 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 UBFD1O14562 309 aaKnown RBP17.01■□□□□ 0.31
CXXC1-212ENST00000589940 MAP3K13O43283 966 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 SLC35G4P0C7Q5 338 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 THEGLP0DJG4 465 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 TSPAN8P19075 237 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 GGT5P36269 586 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 BDKRB1P46663 353 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 HSPA7P48741 367 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 SRP54P61011 504 aaKnown RBP17.01■□□□□ 0.31
CXXC1-212ENST00000589940 TSSK4Q6SA08 328 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 AGR3Q8TD06 166 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 TRPC4APQ8TEL6 797 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 C10orf82Q8WW14 230 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 CD244Q9BZW8 370 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 KCNK13Q9HB14 408 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 PNMA8BQ9ULN7 279 aaPredicted RBP17.01■□□□□ 0.31
CXXC1-212ENST00000589940 PSMD13Q9UNM6 376 aa17.01■□□□□ 0.31
CXXC1-212ENST00000589940 CACNA1IQ9P0X4 2223 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 MEI4A8MW99 385 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 IFRD1O00458 451 aaPredicted RBP17■□□□□ 0.31
CXXC1-212ENST00000589940 BCKDHBP21953 392 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 RPL10P27635 214 aaKnown RBP17■□□□□ 0.31
CXXC1-212ENST00000589940 HK2P52789 917 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 LRP8Q14114 963 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 ALG11Q2TAA5 492 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 SH2D4BQ5SQS7 431 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 TTC23LQ6PF05 361 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 RD3Q7Z3Z2 195 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 RMDN2Q96LZ7 410 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 CCDC138Q96M89 665 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 HSPA12BQ96MM6 686 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 WWP1Q9H0M0 922 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 ZBTB26Q9HCK0 441 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 SEMA4BQ9NPR2 832 aaPredicted RBP17■□□□□ 0.31
CXXC1-212ENST00000589940 KCNK4Q9NYG8 393 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 USH1CQ9Y6N9 552 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 DGKBQ9Y6T7 804 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 SPTY2D1-AS1A0A0U1RR47 76 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 KRT87PA6NCN2 255 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 MLYCDO95822 493 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 IDSP22304 550 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 CLCNKAP51800 687 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 AQP5P55064 265 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 CCSMST1Q4G0I0 132 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 PHF6Q8IWS0 365 aaKnown RBP eCLIP17■□□□□ 0.31
CXXC1-212ENST00000589940 KIRREL3Q8IZU9 778 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 ATL1Q8WXF7 558 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 TFGQ92734 400 aaPredicted RBP17■□□□□ 0.31
CXXC1-212ENST00000589940 FBXL8Q96CD0 374 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 KLHDC7BQ96G42 594 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 HGH1Q9BTY7 390 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 OPTCQ9UBM4 332 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 ASF1AQ9Y294 204 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 ST14Q9Y5Y6 855 aa17■□□□□ 0.31
CXXC1-212ENST00000589940 PPP6CO00743 305 aa16.99■□□□□ 0.31
CXXC1-212ENST00000589940 SCAMP1O15126 338 aa16.99■□□□□ 0.31
CXXC1-212ENST00000589940 LAMTOR5O43504 91 aa16.99■□□□□ 0.31
CXXC1-212ENST00000589940 STK16O75716 305 aa16.99■□□□□ 0.31
CXXC1-212ENST00000589940 TDGF1P13385 188 aa16.99■□□□□ 0.31
CXXC1-212ENST00000589940 ALOX15P16050 662 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms