RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 SOWAHDA6NJG2 315 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 ZNF749O43361 778 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 LDB2O43679 373 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 DPM1O60762 260 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 RAB40ALP0C0E4 278 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 AGXTP21549 392 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 CETN2P41208 172 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 RWDD2BP57060 319 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 BOP1Q14137 746 aaKnown RBP13.28□□□□□ -0.28
HDAC5-208ENST00000588419 NCF4Q15080 339 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 SYTL3Q4VX76 610 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 ZNF789Q5FWF6 425 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 MLIPQ5VWP3 458 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 NAPRTQ6XQN6 538 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 CDHR3Q6ZTQ4 885 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 RAB43Q86YS6 212 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 GPR135Q8IZ08 494 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 CLDN19Q8N6F1 224 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 C19orf47Q8N9M1 422 aaKnown RBP13.28□□□□□ -0.28
HDAC5-208ENST00000588419 GALNT11Q8NCW6 608 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 OR5AR1Q8NGP9 310 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 ADAMTS17Q8TE56 1095 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 HEXDCQ8WVB3 486 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 ELMO1Q92556 727 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 TFGQ92734 400 aaPredicted RBP13.28□□□□□ -0.28
HDAC5-208ENST00000588419 SGSM3Q96HU1 749 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 PSMG3-AS1Q96PY0 264 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 TRAPPC9Q96Q05 1148 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 ALS2CR12Q96Q35 445 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 CASS4Q9NQ75 786 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 GPR83Q9NYM4 423 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 SMARCAL1Q9NZC9 954 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 GPN3Q9UHW5 284 aaPredicted RBP13.28□□□□□ -0.28
HDAC5-208ENST00000588419 PLAGL1Q9UM63 463 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 PADI2Q9Y2J8 665 aa13.28□□□□□ -0.28
HDAC5-208ENST00000588419 MDC1Q14676 2089 aaKnown RBP13.28□□□□□ -0.28
HDAC5-208ENST00000588419 LRRK2Q5S007 2527 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 C17orf113A0A1B0GUU1 675 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 A1L4Q6 167 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 SORBS2O94875 1100 aaKnown RBP13.27□□□□□ -0.29
HDAC5-208ENST00000588419 TJP3O95049 919 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 IPO7O95373 1038 aaKnown RBP13.27□□□□□ -0.29
HDAC5-208ENST00000588419 RRADP55042 308 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 CSE1LP55060 971 aaKnown RBP13.27□□□□□ -0.29
HDAC5-208ENST00000588419 MRPL49Q13405 166 aaKnown RBP13.27□□□□□ -0.29
HDAC5-208ENST00000588419 INPP5JQ15735 1006 aaPredicted RBP13.27□□□□□ -0.29
HDAC5-208ENST00000588419 DBN1Q16643 649 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 SKOR2Q2VWA4 1001 aaPredicted RBP13.27□□□□□ -0.29
HDAC5-208ENST00000588419 DENND5AQ6IQ26 1287 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 JMJD6Q6NYC1 403 aaPredicted RBP13.27□□□□□ -0.29
HDAC5-208ENST00000588419 SPESP1Q6UW49 350 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 ZNF517Q6ZMY9 492 aaPredicted RBP13.27□□□□□ -0.29
HDAC5-208ENST00000588419 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 ZBTB2Q8N680 514 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 PPP1R2P1Q96PQ5 205 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 MVB12BQ9H7P6 319 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 SYTL2Q9HCH5 934 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 PLEKHB1Q9UF11 243 aaPredicted RBP13.27□□□□□ -0.29
HDAC5-208ENST00000588419 NDOR1Q9UHB4 597 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 ICKQ9UPZ9 632 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 ASF1AQ9Y294 204 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 MAP4K5Q9Y4K4 846 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 PCDHA3Q9Y5H8 950 aa13.27□□□□□ -0.29
HDAC5-208ENST00000588419 RCCD1A6NED2 376 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 OR51F1A6NGY5 319 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 AGAP14A8MT82 685 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 OR2B3O76000 313 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 CBSLP0DN79 551 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 UGT2B7P16662 529 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 CBSP35520 551 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 FOLR3P41439 243 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 FOXL2P58012 376 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 SPTBN1Q01082 2364 aaKnown RBP13.26□□□□□ -0.29
HDAC5-208ENST00000588419 CACNG1Q06432 222 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 MSLNQ13421 630 aaPredicted RBP13.26□□□□□ -0.29
HDAC5-208ENST00000588419 GPR33Q49SQ1 333 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 SLC6A19Q695T7 634 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 MED25Q71SY5 747 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 ADGRF3Q8IZF5 1079 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 TMEM102Q8N9M5 508 aaPredicted RBP13.26□□□□□ -0.29
HDAC5-208ENST00000588419 FAM71DQ8N9W8 422 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 PRR7Q8TB68 274 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 SSC4DQ8WTU2 575 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 PITPNM3Q9BZ71 974 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 SLC29A3Q9BZD2 475 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 TFB2MQ9H5Q4 396 aaKnown RBP13.26□□□□□ -0.29
HDAC5-208ENST00000588419 FAM60AQ9NP50 221 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 TXLNGQ9NUQ3 528 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 NLE1Q9NVX2 485 aaPredicted RBP13.26□□□□□ -0.29
HDAC5-208ENST00000588419 IMPACTQ9P2X3 320 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 FEZ2Q9UHY8 353 aaPredicted RBP13.26□□□□□ -0.29
HDAC5-208ENST00000588419 PACSIN2Q9UNF0 486 aaPredicted RBP13.26□□□□□ -0.29
HDAC5-208ENST00000588419 PTRH2Q9Y3E5 179 aaKnown RBP13.26□□□□□ -0.29
HDAC5-208ENST00000588419 PRSS21Q9Y6M0 314 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 DUSP10Q9Y6W6 482 aa13.26□□□□□ -0.29
HDAC5-208ENST00000588419 DOCK10Q96BY6 2186 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 IGLV3-16A0A075B6K0 115 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 NBPF19A0A087WUL8 3843 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 GOLGA6L9A6NEM1 432 aa13.25□□□□□ -0.29
HDAC5-208ENST00000588419 ISM1B1AKI9 464 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms