RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 PLK5Q496M5 336 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 UNC50Q53HI1 259 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 ZNF678Q5SXM1 525 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 LYSMD4Q5XG99 296 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 ATG16L1Q676U5 607 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 CAPRIN2Q6IMN6 1127 aaKnown RBP11.03□□□□□ -0.64
VMP1-207ENST00000588131 DUS1LQ6P1R4 473 aaKnown RBP11.03□□□□□ -0.64
VMP1-207ENST00000588131 C11orf74Q86VG3 221 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 IQCHQ86VS3 1027 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 PARGQ86W56 976 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 NRROSQ86YC3 692 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 DCP2Q8IU60 420 aaKnown RBP11.03□□□□□ -0.64
VMP1-207ENST00000588131 SLC22A9Q8IVM8 553 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 PHACTR4Q8IZ21 702 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 CCNYL1Q8N7R7 359 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 ESAMQ96AP7 390 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 CCDC126Q96EE4 140 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 L3HYPDHQ96EM0 354 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 CHMP6Q96FZ7 201 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 INSM2Q96T92 566 aaPredicted RBP11.03□□□□□ -0.64
VMP1-207ENST00000588131 EGFL8Q99944 293 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 TMEM79Q9BSE2 394 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 GSTO2Q9H4Y5 243 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 PARVBQ9HBI1 364 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 C11orf16Q9NQ32 467 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 PRDM8Q9NQV8 689 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 FGFR1OP2Q9NVK5 253 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 TRNAU1APQ9NX07 287 aaKnown RBP11.03□□□□□ -0.64
VMP1-207ENST00000588131 CIDEBQ9UHD4 219 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 ACSL5Q9ULC5 683 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 TMCO1Q9UM00 188 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 CFAP20Q9Y6A4 193 aaKnown RBP11.03□□□□□ -0.64
VMP1-207ENST00000588131 ABCA7Q8IZY2 2146 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 ZFC3H1O60293 1989 aaKnown RBP11.03□□□□□ -0.64
VMP1-207ENST00000588131 PDZK1P1A8MUH7 402 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 TMEM114B3SHH9 223 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 VILLO15195 856 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 BCAT2O15382 392 aaPredicted RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 NPHS1O60500 1241 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 EDF1O60869 148 aaKnown RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 SNNO75324 88 aaPredicted RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 H2AFYO75367 372 aaKnown RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 CATP04040 527 aaKnown RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 S100BP04271 92 aaPredicted RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 CHRNGP07510 517 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 RPS17P08708 135 aaKnown RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 DRD4P21917 467 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 IDSP22304 550 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 GRK2P25098 689 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 MAP4P27816 1152 aaKnown RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 EEF1DP29692 281 aaKnown RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 SLC1A6P48664 564 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 CSNK1EP49674 416 aaKnown RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 ALDH18A1P54886 795 aaKnown RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 ABCE1P61221 599 aaKnown RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 HERVK_113P63132 956 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 CDKL1Q00532 357 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 OCRLQ01968 901 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 ASPHQ12797 758 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 OVGP1Q12889 678 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 LRP8Q14114 963 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 GRB7Q14451 532 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 CLCA4Q14CN2 919 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 ANGPT1Q15389 498 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 ZXDCQ2QGD7 858 aaPredicted RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 ZNF528Q3MIS6 628 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 CGB2Q6NT52 195 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 SLC30A9Q6PML9 568 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 UNC5DQ6UXZ4 953 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 RAB44Q7Z6P3 723 aaPredicted RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 LSMEM2Q8N112 164 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 PHC3Q8NDX5 983 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 OR5AR1Q8NGP9 310 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 SREK1Q8WXA9 508 aaKnown RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 TFGQ92734 400 aaPredicted RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 RHBDF1Q96CC6 855 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 FOPNLQ96NB1 174 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 NSUN5Q96P11 429 aaKnown RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 SORT1Q99523 831 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 PKP4Q99569 1192 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 ERVK-6Q9BXR3 956 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 DRC3Q9H069 523 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 EPN3Q9H201 632 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 TMEM74BQ9NUR3 256 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 ARL15Q9NXU5 204 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 PSD3Q9NYI0 1048 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 SCHIP1Q9P0W5 487 aaPredicted RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 TBC1D29Q9UFV1 150 aa11.02□□□□□ -0.65
VMP1-207ENST00000588131 PTBP2Q9UKA9 531 aaKnown RBP11.02□□□□□ -0.65
VMP1-207ENST00000588131 A6NCN8 305 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 OR52A4PA6NMU1 304 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 SRRM3A6NNA2 597 aaPredicted RBP11.01□□□□□ -0.65
VMP1-207ENST00000588131 IFRD1O00458 451 aaPredicted RBP11.01□□□□□ -0.65
VMP1-207ENST00000588131 SUPT7LO94864 414 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 CSF2P04141 144 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 ANXA5P08758 320 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 HIST1H2AGP0C0S8 130 aaPredicted RBP11.01□□□□□ -0.65
VMP1-207ENST00000588131 NME1P15531 152 aaKnown RBP11.01□□□□□ -0.65
VMP1-207ENST00000588131 JUNDP17535 347 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 TSPAN8P19075 237 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms