RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 MRPL48Q96GC5 212 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 VPS39Q96JC1 886 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 C9orf72Q96LT7 481 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 QKIQ96PU8 341 aaKnown RBP eCLIP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 MEIS3Q99687 375 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 MAGEB5Q9BZ81 275 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 SLC22A4Q9H015 551 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 PCDHAC1Q9H158 963 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 ALX4Q9H161 411 aaPredicted RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 ADAMTS10Q9H324 1103 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 OR51M1Q9H341 326 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 LDAHQ9H6V9 325 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 TDRD3Q9H7E2 651 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CHODLQ9H9P2 273 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 LRRC4CQ9HCJ2 640 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 TM9SF3Q9HD45 589 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 MRPS30Q9NP92 439 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 SAMHD1Q9Y3Z3 626 aaKnown RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 CLIC4Q9Y696 253 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 SESN1Q9Y6P5 492 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 ZFP37Q9Y6Q3 630 aaPredicted RBP5.55□□□□□ -1.52
LINC01538-201ENST00000588074 DUSP10Q9Y6W6 482 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 KIF20BQ96Q89 1820 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 IRS2Q9Y4H2 1338 aa5.55□□□□□ -1.52
LINC01538-201ENST00000588074 SAGE2PA6NJ88 616 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PYCARD-AS1I3L0S3 204 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 KIAA0391O15091 583 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 SMAD6O43541 496 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 EPOP01588 193 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ACAA1P09110 424 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 RNF224P0DH78 156 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 CYP7A1P22680 504 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 HOXA7P31268 230 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 FOXN2P32314 431 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 CRHR1P34998 444 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 OPRL1P41146 370 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 RPL35P42766 123 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 AKR1D1P51857 326 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 BCAT1P54687 386 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 CDH4P55283 916 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 CDH6P55285 790 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TAS2R60P59551 318 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 AP1S1P61966 158 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TRAF2Q12933 501 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 DNASE1L3Q13609 305 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 FLOT2Q14254 428 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 SLC29A2Q14542 456 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ZNF169Q14929 603 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ZMYND11Q15326 602 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PDK4Q16654 411 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 KLHL12Q53G59 568 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 FSCBQ5H9T9 825 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 MARCH8Q5T0T0 291 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 KRT80Q6KB66 452 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ATG14Q6ZNE5 492 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 FAM214BQ7L5A3 538 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ANKS1BQ7Z6G8 1248 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 CATSPER3Q86XQ3 398 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ADGRG3Q86Y34 549 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 FAM90A1Q86YD7 464 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 HIPK1Q86Z02 1210 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PHC2Q8IXK0 858 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TIGD4Q8IY51 512 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ARHGEF28Q8N1W1 1705 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PARP8Q8N3A8 854 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ARL14Q8N4G2 192 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PCDH20Q8N6Y1 951 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 C12orf29Q8N999 325 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 CLHC1Q8NHS4 586 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ZFAND1Q8TCF1 268 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 BLOC1S5Q8TDH9 187 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 RFKQ969G6 155 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TUBGCP3Q96CW5 907 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 SGTBQ96EQ0 304 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PPP1R36Q96LQ0 422 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 CAMK1GQ96NX5 476 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 CSPG4P5Q96PW8 444 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PKP4Q99569 1192 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 FAM213AQ9BRX8 229 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 RTKNQ9BST9 563 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 FSD1Q9BTV5 496 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PAPOLGQ9BWT3 736 aaKnown RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ZYG11BQ9C0D3 744 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 SLC25A18Q9H1K4 315 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TTYH1Q9H313 450 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 C11orf49Q9H6J7 331 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TMEM8AQ9HCN3 771 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 KCNK9Q9NPC2 374 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PRDM5Q9NQX1 630 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ZDHHC18Q9NUE0 388 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 DECR2Q9NUI1 292 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 NUDT15Q9NV35 164 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 VSX1Q9NZR4 365 aaPredicted RBP5.54□□□□□ -1.52
LINC01538-201ENST00000588074 C5AR2Q9P296 337 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 ANKFY1Q9P2R3 1169 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 LGALS13Q9UHV8 139 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 MID2Q9UJV3 735 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TBX20Q9UMR3 447 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 PSMD13Q9UNM6 376 aa5.54□□□□□ -1.52
LINC01538-201ENST00000588074 TFR2Q9UP52 801 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms