RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ENO1P06733 434 aaKnown RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 RPS17P08708 135 aaKnown RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 HOXC4P09017 264 aaPredicted RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 SBK3P0C264 359 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 UROSP10746 265 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 ACP5P13686 325 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 HGFP14210 728 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 ZNF8P17098 575 aaPredicted RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 GM2AP17900 193 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 NCF2P19878 526 aaPredicted RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 MPSTP25325 297 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 ACSL1P33121 698 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 HSD17B2P37059 387 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 GNPDA1P46926 289 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 HSPA7P48741 367 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 BLKP51451 505 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 CTSCP53634 463 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 PNLIPRP1P54315 467 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 PPP2CBP62714 309 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 PPP2CAP67775 309 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 IRX1P78414 480 aaPredicted RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 MXRA7P84157 204 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 ARHGAP8P85298 464 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 ILF3Q12906 894 aaKnown RBP eCLIP6.05□□□□□ -1.44
LIG3-206ENST00000586058 MAD2L1Q13257 205 aaPredicted RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 TSTA3Q13630 321 aaPredicted RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 GTF2H2Q13888 395 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 NFATC4Q14934 902 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 PCBP2Q15366 365 aaKnown RBP eCLIP6.05□□□□□ -1.44
LIG3-206ENST00000586058 MAPRE2Q15555 327 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 IMPG1Q17R60 797 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 USP39Q53GS9 565 aaKnown RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 SPDYAQ5MJ70 313 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 ZNF648Q5T619 568 aaPredicted RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 THEMIS2Q5TEJ8 643 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 CAPN13Q6MZZ7 669 aaPredicted RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 GTF2H2CQ6P1K8 395 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 SBSNQ6UWP8 590 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 NAPRTQ6XQN6 538 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 CHST15Q7LFX5 561 aaPredicted RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 YTHDF3Q7Z739 585 aaKnown RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 PDZD3Q86UT5 571 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 C11orf74Q86VG3 221 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 DCP2Q8IU60 420 aaKnown RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 DCUN1D3Q8IWE4 304 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 SYTL1Q8IYJ3 562 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 CLYBLQ8N0X4 340 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 ARHGAP24Q8N264 748 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 OXR1Q8N573 874 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 TEX9Q8N6V9 391 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 PLA2G15Q8NCC3 412 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 TRPC4APQ8TEL6 797 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 RAD51AP1Q96B01 352 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 REPS1Q96D71 796 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 MED8Q96G25 268 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 TOE1Q96GM8 510 aaKnown RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 ZNF382Q96SR6 550 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 GPR174Q9BXC1 333 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 C1QTNF3Q9BXJ4 246 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 SLC12A9Q9BXP2 914 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 TPSD1Q9BZJ3 242 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 SHCBP1LQ9BZQ2 653 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 CD244Q9BZW8 370 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 FOXQ1Q9C009 403 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 CHRDQ9H2X0 955 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 GSTO2Q9H4Y5 243 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 SLC32A1Q9H598 525 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 ACTR8Q9H981 624 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 CARS2Q9HA77 564 aaKnown RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 FZD3Q9NPG1 666 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.05□□□□□ -1.44
LIG3-206ENST00000586058 GALPQ9UBC7 116 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 LNPEPQ9UIQ6 1025 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 PCTPQ9UKL6 214 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 ZFR2Q9UPR6 939 aaKnown RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 ASF1AQ9Y294 204 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 SIT1Q9Y3P8 196 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 DYRK1BQ9Y463 629 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 MTF2Q9Y483 593 aaPredicted RBP6.05□□□□□ -1.44
LIG3-206ENST00000586058 GPSM3Q9Y4H4 160 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 PCDHB3Q9Y5E6 796 aa6.05□□□□□ -1.44
LIG3-206ENST00000586058 SLC5A10A0PJK1 596 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 KRBA1A5PL33 1030 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 CCT8L1PA6NM43 557 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 E2F3O00716 465 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 TNFRSF10CO14798 259 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 CHUKO15111 745 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 ITM2AO43736 263 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 PSIP1O75475 530 aaKnown RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 RASGRP1O95267 797 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 SIX3O95343 332 aaPredicted RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 MATN4O95460 622 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 ESRRBO95718 433 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 TNFP01375 233 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 KRT6AP02538 564 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 KRT6BP04259 564 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 CHRNGP07510 517 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 SERPINA6P08185 405 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 EBLN1P0CF75 366 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 CTSEP14091 401 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms