RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 INSM2Q96T92 566 aaPredicted RBP15.74■□□□□ 0.11
SS18-226ENST00000585241 MECRQ9BV79 373 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 C1QTNF3Q9BXJ4 246 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 TRIM54Q9BYV2 358 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 CAAP1Q9H8G2 361 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 CAPN10Q9HC96 672 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 PRDM8Q9NQV8 689 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 SPASTQ9UBP0 616 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 PCDHGA5Q9Y5G8 931 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 SNX11Q9Y5W9 270 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 PI4KAP42356 2102 aa15.74■□□□□ 0.11
SS18-226ENST00000585241 PDZK1P1A8MUH7 402 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 SUPT3HB4E1H0 165 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 MYO1CO00159 1063 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 KLF11O14901 512 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 TRIM13O60858 407 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 SUPT3HO75486 399 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 RPN2P04844 631 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 CELA2BP08218 269 aaPredicted RBP15.73■□□□□ 0.11
SS18-226ENST00000585241 FGF3P11487 239 aaPredicted RBP15.73■□□□□ 0.11
SS18-226ENST00000585241 F3P13726 295 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 CTSEP14091 401 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 RPL10P27635 214 aaKnown RBP15.73■□□□□ 0.11
SS18-226ENST00000585241 RPIAP49247 311 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 GYS2P54840 703 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 ALDH18A1P54886 795 aaKnown RBP15.73■□□□□ 0.11
SS18-226ENST00000585241 GUCY1A3Q02108 690 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 CLCA4Q14CN2 919 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 SETDB1Q15047 1291 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 ELOCQ15369 112 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 ZNF423Q2M1K9 1284 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 PRRT3Q5FWE3 981 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 LIPMQ5VYY2 423 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 SLC23A3Q6PIS1 610 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 SLC30A9Q6PML9 568 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 PRR23BQ6ZRT6 265 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 NUDCD3Q8IVD9 361 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 TRIM42Q8IWZ5 723 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 TBC1D21Q8IYX1 336 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 FBXO39Q8N4B4 442 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 OR5K2Q8NHB8 316 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 MAGEC3Q8TD91 643 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 UBTD2Q8WUN7 234 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 L3HYPDHQ96EM0 354 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 MAGEB18Q96M61 343 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 ELF4Q99607 663 aaPredicted RBP15.73■□□□□ 0.11
SS18-226ENST00000585241 PRRX2Q99811 253 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 PAIP2Q9BPZ3 127 aaKnown RBP15.73■□□□□ 0.11
SS18-226ENST00000585241 LRFN3Q9BTN0 628 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 SCHIP1Q9P0W5 487 aaPredicted RBP15.73■□□□□ 0.11
SS18-226ENST00000585241 TAAR2Q9P1P5 351 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 PTBP2Q9UKA9 531 aaKnown RBP15.73■□□□□ 0.11
SS18-226ENST00000585241 PSMD13Q9UNM6 376 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 ASF1AQ9Y294 204 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 PCDH15Q96QU1 1955 aa15.73■□□□□ 0.11
SS18-226ENST00000585241 H2AFYO75367 372 aaKnown RBP15.72■□□□□ 0.11
SS18-226ENST00000585241 PIAS2O75928 621 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 EML2O95834 649 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 HIST1H2AGP0C0S8 130 aaPredicted RBP15.72■□□□□ 0.11
SS18-226ENST00000585241 MTHFD1P11586 935 aaKnown RBP15.72■□□□□ 0.11
SS18-226ENST00000585241 HIST1H2ADP20671 130 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 GGT5P36269 586 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 HALP42357 657 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 BDKRB1P46663 353 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 ASPHQ12797 758 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 GRB7Q14451 532 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 RPE65Q16518 533 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 TUBB8Q3ZCM7 444 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 SULT1C3Q6IMI6 304 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 METTL2BQ6P1Q9 378 aaKnown RBP15.72■□□□□ 0.11
SS18-226ENST00000585241 KLHDC8AQ8IYD2 350 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 TCAIMQ8N3R3 496 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 PTGR2Q8N8N7 351 aaPredicted RBP15.72■□□□□ 0.11
SS18-226ENST00000585241 ZNF548Q8NEK5 533 aaPredicted RBP15.72■□□□□ 0.11
SS18-226ENST00000585241 CFAP61Q8NHU2 1237 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 DYDC1Q8WWB3 177 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 EXT2Q93063 718 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 RHBDF1Q96CC6 855 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 FBXL8Q96CD0 374 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 HIST1H2AHQ96KK5 128 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 CCDC138Q96M89 665 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 C12orf66Q96MD2 445 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 HIST1H2AJQ99878 128 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 H2AFJQ9BTM1 129 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 MVB12BQ9H7P6 319 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 UTP6Q9NYH9 597 aaKnown RBP15.72■□□□□ 0.11
SS18-226ENST00000585241 NCKIPSDQ9NZQ3 722 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 CD274Q9NZQ7 290 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 HEBP2Q9Y5Z4 205 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 CSNK1G3Q9Y6M4 447 aa15.72■□□□□ 0.11
SS18-226ENST00000585241 ARHGEF17Q96PE2 2063 aaPredicted RBP15.72■□□□□ 0.11
SS18-226ENST00000585241 WDR91A4D1P6 747 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 OR5K4A6NMS3 321 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 LMO7DNF2Z398 122 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 AQP9O43315 295 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 SNX2O60749 519 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 SERPINE1P05121 402 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 RPS17P08708 135 aaKnown RBP15.71■□□□□ 0.11
SS18-226ENST00000585241 ANXA5P08758 320 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 ERGP11308 486 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms