RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 FAM167BQ9BTA0 163 aa15.8■□□□□ 0.12
ERBB2-222ENST00000584908 TRIM31Q9BZY9 425 aa15.8■□□□□ 0.12
ERBB2-222ENST00000584908 TRIT1Q9H3H1 467 aaKnown RBP15.8■□□□□ 0.12
ERBB2-222ENST00000584908 HRASLS2Q9NWW9 162 aa15.8■□□□□ 0.12
ERBB2-222ENST00000584908 KLHL3Q9UH77 587 aa15.8■□□□□ 0.12
ERBB2-222ENST00000584908 ASF1AQ9Y294 204 aa15.8■□□□□ 0.12
ERBB2-222ENST00000584908 SNX24Q9Y343 169 aa15.8■□□□□ 0.12
ERBB2-222ENST00000584908 OR6C74A6NCV1 312 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 TLCD2A6NGC4 264 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 EFCAB7A8K855 629 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 KIF1CO43896 1103 aaKnown RBP15.79■□□□□ 0.12
ERBB2-222ENST00000584908 TPBGLP0DKB5 382 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 PKMP14618 531 aaKnown RBP15.79■□□□□ 0.12
ERBB2-222ENST00000584908 NELFEP18615 380 aaKnown RBP15.79■□□□□ 0.12
ERBB2-222ENST00000584908 ATP5DP30049 168 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 FMO4P31512 558 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 ELK3P41970 407 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 SLC1A2P43004 574 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 CKAP4Q07065 602 aaKnown RBP15.79■□□□□ 0.12
ERBB2-222ENST00000584908 CTBP1Q13363 440 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 CACHD1Q5VU97 1274 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 UNC5DQ6UXZ4 953 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 LRRC69Q6ZNQ3 347 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 OTOAQ7RTW8 1153 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 GALNT7Q86SF2 657 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 KMT5CQ86Y97 462 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 SPACA3Q8IXA5 215 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 UNC5BQ8IZJ1 945 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 OR4E2Q8NGC2 313 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 ART4Q93070 314 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 SLC41A2Q96JW4 573 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 PWWP2AQ96N64 755 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 TEFMQ96QE5 360 aaKnown RBP15.79■□□□□ 0.12
ERBB2-222ENST00000584908 ASPSCR1Q9BZE9 553 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 SRMSQ9H3Y6 488 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 FOXJ2Q9P0K8 574 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 KLHL42Q9P2K6 505 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 FBXO5Q9UKT4 447 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 CRYL1Q9Y2S2 319 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 MED16Q9Y2X0 877 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 COMMD10Q9Y6G5 202 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 ZFYVE26Q68DK2 2539 aa15.79■□□□□ 0.12
ERBB2-222ENST00000584908 IGHV5-51A0A0C4DH38 117 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 KIF2AO00139 706 aaPredicted RBP15.78■□□□□ 0.12
ERBB2-222ENST00000584908 NIPSNAP2O75323 286 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 TLE3Q04726 772 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 WHAMMP3Q1A5X7 153 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 HSP90AA5PQ58FG0 334 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 ZNF549Q6P9A3 640 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 UNC5AQ6ZN44 842 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 FAM92BQ6ZTR7 304 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 KIAA0408Q6ZU52 694 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 AMIGO1Q86WK6 493 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 FAM129CQ86XR2 697 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 DTX1Q86Y01 620 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 ADGRF3Q8IZF5 1079 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 C2CD4AQ8NCU7 369 aaPredicted RBP15.78■□□□□ 0.12
ERBB2-222ENST00000584908 GABPB2Q8TAK5 448 aaPredicted RBP15.78■□□□□ 0.12
ERBB2-222ENST00000584908 KCNE4Q8WWG9 221 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 KCNJ9Q92806 393 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 PMEPA1Q969W9 287 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 DCBLD2Q96PD2 775 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 ZPBPQ9BS86 351 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 HGH1Q9BTY7 390 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 SPRY4Q9C004 299 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 FBXO6Q9NRD1 293 aaPredicted RBP15.78■□□□□ 0.12
ERBB2-222ENST00000584908 SLC39A1Q9NY26 324 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 GRHL1Q9NZI5 618 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 ZC3H7BQ9UGR2 993 aaKnown RBP15.78■□□□□ 0.12
ERBB2-222ENST00000584908 POMT2Q9UKY4 750 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 ICKQ9UPZ9 632 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 SNRNP200O75643 2136 aaKnown RBP15.78■□□□□ 0.12
ERBB2-222ENST00000584908 MGAQ8IWI9 3026 aa15.78■□□□□ 0.12
ERBB2-222ENST00000584908 AGRPO00253 132 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 BTN3A3O00478 584 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 BTN3A1O00481 513 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 KDM1AO60341 852 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 RASSF9O75901 435 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 RPN2P04844 631 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 SHMT2P34897 504 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 CLCN7P51798 805 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 KPNA2P52292 529 aaKnown RBP15.77■□□□□ 0.12
ERBB2-222ENST00000584908 CSE1LP55060 971 aaKnown RBP15.77■□□□□ 0.12
ERBB2-222ENST00000584908 MRPS25P82663 173 aaKnown RBP15.77■□□□□ 0.12
ERBB2-222ENST00000584908 CALCOCO2Q13137 446 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 PRKG2Q13237 762 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 DNTTIP2Q5QJE6 756 aaKnown RBP15.77■□□□□ 0.12
ERBB2-222ENST00000584908 DCAF12Q5T6F0 453 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 ARMC6Q6NXE6 501 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 CEACAM20Q6UY09 585 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 CERS2Q96G23 380 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 MAP3K3Q99759 626 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 MENTQ9BUN1 341 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 PITPNM3Q9BZ71 974 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 PHACTR1Q9C0D0 580 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 OR6C2Q9NZP2 312 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 CHMP2BQ9UQN3 213 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 B3GALT1Q9Y5Z6 326 aa15.77■□□□□ 0.12
ERBB2-222ENST00000584908 IGSF10Q6WRI0 2623 aa15.76■□□□□ 0.11
ERBB2-222ENST00000584908 FAM208BQ5VWN6 2430 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms