RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 TSPYL6Q8N831 410 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 CCDC191Q8NCU4 936 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 OR52I2Q8NH67 350 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 WDR20Q8TBZ3 569 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 SNRNP27Q8WVK2 155 aaKnown RBP2.63□□□□□ -1.99
VAPA-208ENST00000584796 RUFY2Q8WXA3 655 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 MPP4Q96JB8 637 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 COG8Q96MW5 612 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 PARK7Q99497 189 aaKnown RBP2.63□□□□□ -1.99
VAPA-208ENST00000584796 FAM110AQ9BQ89 295 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 REEP2Q9BRK0 252 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 NDST4Q9H3R1 872 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 UPF2Q9HAU5 1272 aaKnown RBP2.63□□□□□ -1.99
VAPA-208ENST00000584796 GPR108Q9NPR9 543 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 SLC52A3Q9NQ40 469 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 C2orf42Q9NWW7 574 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 C9orf78Q9NZ63 289 aaPredicted RBP2.63□□□□□ -1.99
VAPA-208ENST00000584796 DBF4Q9UBU7 674 aaPredicted RBP2.63□□□□□ -1.99
VAPA-208ENST00000584796 HSPB7Q9UBY9 170 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 FAM96BQ9Y3D0 163 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 ITPR1Q14643 2758 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 PTPRCP08575 1304 aa2.63□□□□□ -1.99
VAPA-208ENST00000584796 DOCK5Q9H7D0 1870 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 PLXNA4Q9HCM2 1894 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 FLNBO75369 2602 aaKnown RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 NAV2Q8IVL1 2488 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 ZCWPW2A0A1B0GU75 182 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 MED19A0JLT2 244 aaPredicted RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 PI4KAP2A4QPH2 592 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 PI4K2BG5E9Z4 385 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 CXCL11O14625 94 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 EPB41L2O43491 1005 aaKnown RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 TACC1O75410 805 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 RNASEH2AO75792 299 aaKnown RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 IL9P15248 144 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 PAPOLAP51003 745 aaKnown RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 RIPK4P57078 832 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 DSCR10P59022 87 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 FKBP1AP62942 108 aaKnown RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 RUNX1T1Q06455 604 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 GRIK2Q13002 908 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 DDX10Q13206 875 aaKnown RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 ZNF766Q5HY98 468 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 ANKRD45Q5TZF3 282 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 HIST2H2BDQ6DRA6 164 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 OR7E24Q6IFN5 339 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 TTI2Q6NXR4 508 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 DUS1LQ6P1R4 473 aaKnown RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 TMEM81Q6P7N7 255 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 LDHAL6AQ6ZMR3 332 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 SLC46A3Q7Z3Q1 461 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 TMCO2Q7Z6W1 182 aaPredicted RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 TRPT1Q86TN4 253 aaKnown RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 TDRPQ86YL5 185 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 SUGP1Q8IWZ8 645 aaKnown RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 SCYL3Q8IZE3 742 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 SPAG16Q8N0X2 631 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 PI4KAP1Q8N8J0 262 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 CCDC89Q8N998 374 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 C1orf131Q8NDD1 294 aaKnown RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 OR5R1Q8NH85 324 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 HCAR2Q8TDS4 363 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 FCAMRQ8WWV6 532 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 STAMBPL1Q96FJ0 436 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 SLC41A2Q96JW4 573 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 NEUROD6Q96NK8 337 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 QRFPRQ96P65 431 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 LBHD1Q9BQE6 289 aaPredicted RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 C1QTNF1Q9BXJ1 281 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 TKTL2Q9H0I9 626 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 ERVMER34-1Q9H9K5 563 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 C20orf141Q9NUB4 165 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 MORF4L1Q9UBU8 362 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 POLG2Q9UHN1 485 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 AGTPBP1Q9UPW5 1226 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 DDX49Q9Y6V7 483 aaKnown RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 RALGAPA2Q2PPJ7 1873 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 DSPP15924 2871 aaKnown RBP2.62□□□□□ -1.99
VAPA-208ENST00000584796 MYH7BA7E2Y1 1941 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 MYH4Q9Y623 1939 aa2.62□□□□□ -1.99
VAPA-208ENST00000584796 A0A087X002 238 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 CTSVO60911 334 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 FRAT2O75474 233 aaPredicted RBP2.61□□□□□ -1.99
VAPA-208ENST00000584796 PGK1P00558 417 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 URODP06132 367 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 ZNF853P0CG23 659 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 CYBAP13498 195 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 CSF2RAP15509 400 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 ZNF26P17031 533 aaPredicted RBP2.61□□□□□ -1.99
VAPA-208ENST00000584796 POLR2CP19387 275 aaPredicted RBP2.61□□□□□ -1.99
VAPA-208ENST00000584796 KRT9P35527 623 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 CLK1P49759 484 aaKnown RBP2.61□□□□□ -1.99
VAPA-208ENST00000584796 CSNK2A1P68400 391 aaPredicted RBP2.61□□□□□ -1.99
VAPA-208ENST00000584796 SPP2Q13103 211 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 GCKRQ14397 625 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 TAF5Q15542 800 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 TMEM35AQ53FP2 167 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 TECRLQ5HYJ1 363 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 ZNF704Q6ZNC4 412 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms