RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 FADS2P1A8MWK0 482 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 SLCO1B7G3V0H7 640 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 STX16-NPEPL1H3BU86 382 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 STX16O14662 325 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 GPR39O43194 453 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 ITM2AO43736 263 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 SGTAO43765 313 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 SMIM24O75264 130 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 RECQL5O94762 991 aaPredicted RBP11.71□□□□□ -0.53
GGA3-217ENST00000583667 AOAHP28039 575 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 ARRB2P32121 409 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 PSMD8P48556 350 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 CLDN6P56747 220 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 TAS2R38P59533 333 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 PRKAA1Q13131 559 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 STARD3Q14849 445 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 OR4D1Q15615 310 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 HLA-BQ31612 363 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 LACTB2Q53H82 288 aaPredicted RBP11.71□□□□□ -0.53
GGA3-217ENST00000583667 PLEKHS1Q5SXH7 462 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 ARHGAP40Q5TG30 622 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 AGBL4Q5VU57 503 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 NEK5Q6P3R8 708 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 ATG14Q6ZNE5 492 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 ZCCHC23Q6ZST2 131 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 ADAMTSL2Q86TH1 951 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 RASGRP3Q8IV61 690 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 WDR75Q8IWA0 830 aaKnown RBP11.71□□□□□ -0.53
GGA3-217ENST00000583667 HOMEZQ8IX15 550 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 AADATQ8N5Z0 425 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 ZBTB2Q8N680 514 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 GBP7Q8N8V2 638 aaPredicted RBP11.71□□□□□ -0.53
GGA3-217ENST00000583667 SIDT2Q8NBJ9 832 aaKnown RBP11.71□□□□□ -0.53
GGA3-217ENST00000583667 EEF1AKMT1Q8WVE0 214 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 CCT6BQ92526 530 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 FUBP1Q96AE4 644 aaKnown RBP11.71□□□□□ -0.53
GGA3-217ENST00000583667 DCUN1D1Q96GG9 259 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 ZNF514Q96K75 400 aaPredicted RBP11.71□□□□□ -0.53
GGA3-217ENST00000583667 NRSN2Q9GZP1 204 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 ILKAPQ9H0C8 392 aaPredicted RBP11.71□□□□□ -0.53
GGA3-217ENST00000583667 ALG9Q9H6U8 611 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 RDH14Q9HBH5 336 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 CPNE5Q9HCH3 593 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 PLXNA2O75051 1894 aa11.71□□□□□ -0.53
GGA3-217ENST00000583667 A0A1B0GTW7 788 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 ENO4A6NNW6 628 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 ZNF195O14628 629 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 MID1O15344 667 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 NUAK1O60285 661 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 DCTN3O75935 186 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 CER1O95813 267 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 SOD1P00441 154 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 FTH1P02794 183 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 MPC1LP0DKB6 136 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 CCR10P46092 362 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 ARFIP2P53365 341 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 HNRNPH2P55795 449 aaKnown RBP11.7□□□□□ -0.54
GGA3-217ENST00000583667 HERVK_113P63132 956 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 GALNTL6Q49A17 601 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 ARL13AQ5H913 290 aaPredicted RBP11.7□□□□□ -0.54
GGA3-217ENST00000583667 WDR45BQ5MNZ6 344 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 ZNF678Q5SXM1 525 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 FAM91A1Q658Y4 838 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 TTC23LQ6PF05 361 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 ADAMTSL4Q6UY14 1074 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 ZNF574Q6ZN55 896 aaPredicted RBP11.7□□□□□ -0.54
GGA3-217ENST00000583667 USP30Q70CQ3 517 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 TRPM8Q7Z2W7 1104 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 CPNE9Q8IYJ1 553 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 LSMEM2Q8N112 164 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 CXorf40AQ8TE69 158 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 NUS1Q96E22 293 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 LINGO1Q96FE5 620 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 LINC00615Q96LM1 132 aaPredicted RBP11.7□□□□□ -0.54
GGA3-217ENST00000583667 C1QTNF2Q9BXJ5 285 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 ERVK-6Q9BXR3 956 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 ZNF395Q9H8N7 513 aaPredicted RBP11.7□□□□□ -0.54
GGA3-217ENST00000583667 TRIM39Q9HCM9 518 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 NPHS2Q9NP85 383 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 VTI1BQ9UEU0 232 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 FZD4Q9ULV1 537 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 CYP8B1Q9UNU6 501 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 ITM2BQ9Y287 266 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 DOPEY1Q5JWR5 2465 aa11.7□□□□□ -0.54
GGA3-217ENST00000583667 ERICH4A6NGS2 130 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 IQCF5A8MTL0 148 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 C10orf142B7Z368 130 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 NEMP1O14524 444 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 TERTO14746 1132 aaKnown RBP11.69□□□□□ -0.54
GGA3-217ENST00000583667 SLC16A5O15375 505 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 VEGFDO43915 354 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 LZTS3O60299 673 aaPredicted RBP11.69□□□□□ -0.54
GGA3-217ENST00000583667 MMP20O60882 483 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 ZNF217O75362 1048 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 GPC4O75487 556 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 SLCO2B1O94956 709 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 HSPA4LO95757 839 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 FGF4P08620 206 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 MSH3P20585 1137 aa11.69□□□□□ -0.54
GGA3-217ENST00000583667 CCR7P32248 378 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms