RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 POLR2CP19387 275 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 WT1P19544 449 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 RPS3P23396 243 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PRDX3P30048 256 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PREPP48147 710 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 FNTAP49354 379 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 ADARP55265 1226 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PPP1CAP62136 330 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 COL9A2Q14055 689 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 TMED2Q15363 201 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 TBR1Q16650 682 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 LINC00303Q3SY05 128 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 BORAQ6PGQ7 559 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SDCCAG8Q86SQ7 713 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PRUNE1Q86TP1 453 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 REXO1L1PQ8IX06 675 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SLC22A15Q8IZD6 547 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 MCUQ8NE86 351 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 GRK7Q8WTQ7 553 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 LRFN5Q96NI6 719 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 GPR87Q9BY21 358 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 XAB2Q9HCS7 855 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 KCND1Q9NSA2 647 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 GNPTGQ9UJJ9 305 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SOX13Q9UN79 622 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 VPS9D1Q9Y2B5 631 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PCDHB3Q9Y5E6 796 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PRSS21Q9Y6M0 314 aa12.22□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PIPSLA2A3N6 862 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 TERTO14746 1132 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 OR1I1O60431 355 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 CPNE3O75131 537 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 GPC4O75487 556 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 NDUFS3O75489 264 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 KIAA0754O94854 1291 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SLCO2B1O94956 709 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 KRT14P02533 472 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 EBLN1P0CF75 366 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 CDH3P22223 829 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 AOAHP28039 575 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 COILP38432 576 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 GPS1Q13098 491 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 KCNJ11Q14654 390 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 KIR2DS3Q14952 304 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PTRHD1Q6GMV3 140 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 KIAA0930Q6ICG6 404 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 UNC5DQ6UXZ4 953 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 ADGRF3Q8IZF5 1079 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 PHC3Q8NDX5 983 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 STARD8Q92502 1023 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 AP1M1Q9BXS5 423 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 P2RY12Q9H244 342 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 GEMIN8Q9NWZ8 242 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SOHLH2Q9NX45 425 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 SAMD15Q9P1V8 674 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 LNPEPQ9UIQ6 1025 aa12.21□□□□□ -0.45
CDK5RAP3-222ENST00000581708 BOD1L1Q8NFC6 3051 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 GSAPA4D1B5 854 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 BTN3A3O00478 584 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 BTN3A1O00481 513 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 PHF2O75151 1096 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 FKBP9O95302 570 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 ZNF28P17035 718 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 TCP1P17987 556 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 TCN2P20062 427 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 OGNP20774 298 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 MGAT1P26572 445 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 ATP5DP30049 168 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 CCR7P32248 378 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 CCR10P46092 362 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 CDC20Q12834 499 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 LY6DQ14210 128 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 TYSND1Q2T9J0 566 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 PLEKHS1Q5SXH7 462 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 PWWP2BQ6NUJ5 590 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 TTC27Q6P3X3 843 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 CCDC137Q6PK04 289 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 SPESP1Q6UW49 350 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 HOOK3Q86VS8 718 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 LMNTD2Q8IXW0 634 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 EXD3Q8N9H8 876 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 GALNT6Q8NCL4 622 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 OR5AR1Q8NGP9 310 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 GSDMBQ8TAX9 411 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 CPT1BQ92523 772 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 EXTL1Q92935 676 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 SLC22A18Q96BI1 424 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 ZNF501Q96CX3 271 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 TCTN2Q96GX1 697 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 OSBPL9Q96SU4 736 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 DPH2Q9BQC3 489 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 HGH1Q9BTY7 390 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 RAB11FIP5Q9BXF6 653 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 LHX9Q9NQ69 397 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 ACTR10Q9NZ32 417 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 SERTAD3Q9UJW9 196 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 SNX12Q9UMY4 172 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 CDYLQ9Y232 598 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 NEU2Q9Y3R4 380 aa12.2□□□□□ -0.46
CDK5RAP3-222ENST00000581708 FAM237BA0A1B0GVD1 139 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms