RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 IGLV9-49A0A0B4J1Y8 123 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 MED19A0JLT2 244 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 LRRC72A6NJI9 287 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 SLCO1B7G3V0H7 640 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 BAIAP3O94812 1187 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 FRMD6-AS1P0C7T7 363 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 WNT5AP41221 380 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 SNX16P57768 344 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 TMF1P82094 1093 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 LGALS3BPQ08380 585 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 MELKQ14680 651 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 DCAF10Q5QP82 559 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 C1orf122Q6ZSJ8 110 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 FAM114A1Q8IWE2 563 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 MCEMP1Q8IX19 187 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 LMNTD2Q8IXW0 634 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 ZNF611Q8N823 705 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 TEX19Q8NA77 164 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 OR1J1Q8NGS3 322 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 OLIG1Q8TAK6 271 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 SAT2Q96F10 170 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 NSL1Q96IY1 281 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 PRAC1Q96KF2 57 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 NAP1L4Q99733 375 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 CHCHD6Q9BRQ6 235 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 RTN4RQ9BZR6 473 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 PPIL3Q9H2H8 161 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 ACKR4Q9NPB9 350 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 PLCXD1Q9NUJ7 323 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 ZNF69Q9UC07 566 aa2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.9□□□□□ -1.95
SMCHD1-206ENST00000581631 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 IGHV4-61A0A0C4DH41 118 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 A0A1W2PRB8 838 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 LNP1A1A4G5 178 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 PRR32B1ATL7 298 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 VILLO15195 856 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 EML2O95834 649 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 IGHV4-59P01825 116 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 ACADSP16219 412 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 CAPN3P20807 821 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 SLC15A1P46059 708 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 SP3Q02447 781 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 PNRC1Q12796 327 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 RRS1Q15050 365 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 P2RY6Q15077 328 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 GLIPR1L2Q4G1C9 344 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 GRTP1Q5TC63 336 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 PWWP2BQ6NUJ5 590 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 DOK6Q6PKX4 331 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 SLC16A9Q7RTY1 509 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 ZNF554Q86TJ5 538 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 CPSF7Q8N684 471 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 C1orf131Q8NDD1 294 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 KBTBD8Q8NFY9 601 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 LRRC59Q96AG4 307 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 GIMAP5Q96F15 307 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 C16orf70Q9BSU1 422 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 FGFBP2Q9BYJ0 223 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 ZHX3Q9H4I2 956 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 OSER1Q9NX31 292 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 LARSQ9P2J5 1176 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 HACL1Q9UJ83 578 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 ZNF215Q9UL58 517 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 PLAGL1Q9UM63 463 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 RIPK3Q9Y572 518 aa2.89□□□□□ -1.95
SMCHD1-206ENST00000581631 B4DLN1 442 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 E9PI62 339 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 SSX4O60224 188 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 DOK2O60496 412 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 ZBED4O75132 1171 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 ZWINTO95229 277 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 PSMB10P40306 273 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 NKX2-1P43699 371 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 MRPL12P52815 198 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 SNRPD1P62314 119 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 DMPKQ09013 629 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 AIMP2Q13155 320 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 GPR17Q13304 367 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 RAB41Q5JT25 222 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 CYP4A22Q5TCH4 519 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 HAUS6Q7Z4H7 955 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 CERS3Q8IU89 383 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 OR2AJ1Q8NGZ0 328 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 HSD17B8Q92506 261 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 SKA1Q96BD8 255 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 SGK494Q96LW2 274 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 OR6C1Q96RD1 312 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 PAFAH2Q99487 392 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 MAK16Q9BXY0 300 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 SYNCQ9H7C4 482 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 A4GALTQ9NPC4 353 aa2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 SEC63Q9UGP8 760 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 ASTN2O75129 1339 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 SOS1Q07889 1333 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-206ENST00000581631 IGHV4-4A0A075B6R2 117 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 A0A1W2PQ09 198 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 CTDSP2O14595 271 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 ATP6V0E1O15342 81 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 PAPSS1O43252 624 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms