RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZNF852Q6ZMS4 543 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 DGLUCYQ7Z3D6 616 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 MAB21L3Q8N8X9 362 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 KBTBD3Q8NAB2 608 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 CAMKVQ8NCB2 501 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 SLAMF9Q96A28 289 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 ARSGQ96EG1 525 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 ZNF558Q96NG5 402 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 ACKR4Q9NPB9 350 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 STK26Q9P289 416 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 FAF1Q9UNN5 650 aaPredicted RBP4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 PADI2Q9Y2J8 665 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 GRIP1Q9Y3R0 1128 aa4.42□□□□□ -1.7
SMCHD1-205ENST00000581383 A0A1W2PS18 150 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 HYKKA2RU49 373 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 TMEM221A6NGB7 291 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 C16orf97H3BN30 126 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 CAPN9O14815 690 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 OR10H2O60403 315 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 CTSVO60911 334 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 BAG4O95429 457 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 QDPRP09417 244 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 FDPSP14324 419 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 DGKAP23743 735 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 DVL1P1P54792 670 aaPredicted RBP4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 HILS1P60008 231 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 RBPJQ06330 500 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 ZNF718Q3SXZ3 478 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 MDH1BQ5I0G3 518 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 IL27RAQ6UWB1 636 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 KRT77Q7Z794 578 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 EXOC3L1Q86VI1 746 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 COMMD2Q86X83 199 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 NAGSQ8N159 534 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 OR13A1Q8NGR1 328 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 KIF18AQ8NI77 898 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 CD101Q93033 1021 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 SEPHS2Q99611 448 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 SLC25A23Q9BV35 468 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 PELI2Q9HAT8 420 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 RNF150Q9ULK6 438 aa4.41□□□□□ -1.7
SMCHD1-205ENST00000581383 A0A1W2PRQ8 180 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 TBCAO75347 108 aaKnown RBP4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 PDE9AO76083 593 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 PENKP01210 267 aaPredicted RBP4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 CETPP11597 493 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 GLULP15104 373 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 CYP11B2P19099 503 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 PTAFRP25105 342 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 AZGP1P25311 298 aaKnown RBP4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 THOP1P52888 689 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 RPS18P62269 152 aaKnown RBP4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 PPARDQ03181 441 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 HYAL4Q2M3T9 481 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 PLA2G4FQ68DD2 849 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 DET1Q7L5Y6 550 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 TMPRSS11BQ86T26 416 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 MFN1Q8IWA4 741 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 RNF128Q8TEB7 428 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 ATL1Q8WXF7 558 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 C17orf77Q96MU5 243 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 ZNF583Q96ND8 569 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 BTBD10Q9BSF8 475 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 TRAF4Q9BUZ4 470 aaPredicted RBP4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 APOBEC3GQ9HC16 384 aaKnown RBP4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 MYNNQ9NPC7 610 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 PFDN4Q9NQP4 134 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 SH3GLB2Q9NR46 395 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 MRGBPQ9NV56 204 aa4.4□□□□□ -1.71
SMCHD1-205ENST00000581383 GREB1LQ9C091 1923 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 IGLV5-45A0A087WSX0 123 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 A0A1W2PPI3 338 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 BUB3O43684 328 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 RECQL5O94762 991 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 IGHV4-39P01824 125 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 MPZP25189 248 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 PTPN3P26045 913 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 HSPA4P34932 840 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 HOXA1P49639 335 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 PITX1P78337 314 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 ACSM1Q08AH1 577 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 DMPKQ09013 629 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 TFCP2Q12800 502 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 MFAP5Q13361 173 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 KIR2DS3Q14952 304 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 ZNF672Q499Z4 452 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 SHQ1Q6PI26 577 aaKnown RBP4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 SUSD1Q6UWL2 747 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 FOXL2NBQ6ZUU3 175 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 ERN2Q76MJ5 926 aaKnown RBP4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 GPALPP1Q8IXQ4 340 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 THNSL1Q8IYQ7 743 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 ARHGAP24Q8N264 748 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 CPSF7Q8N684 471 aaKnown RBP4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 ROBO4Q8WZ75 1007 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 SYN2Q92777 582 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 SPATA17Q96L03 361 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 GBP5Q96PP8 586 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 RAB3IPQ96QF0 476 aaPredicted RBP4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 PKP4Q99569 1192 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms