RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 OR10S1Q8NGN2 331 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 OR1J1Q8NGS3 322 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 FAM76AQ8TAV0 307 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 NSL1Q96IY1 281 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 DGAT2Q96PD7 388 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 BTBD10Q9BSF8 475 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 FSD1Q9BTV5 496 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 CCDC106Q9BWC9 280 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 GOLPH3LQ9H4A5 285 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 ZNF696Q9H7X3 374 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 SCRT2Q9NQ03 307 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 EQTNQ9NQ60 294 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 DDX43Q9NXZ2 648 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 OSGIN1Q9UJX0 560 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 FAM169AQ9Y6X4 670 aa4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 SOS1Q07889 1333 aaPredicted RBP4.17□□□□□ -1.74
SMCHD1-204ENST00000581226 DNM1LO00429 736 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 GAPDHSO14556 408 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 OR2T7P0C7T2 308 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 PATE4P0C8F1 98 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 PRSS56P0CW18 603 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 PFKFB1P16118 471 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 BDNFP23560 247 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 SLC6A6P31641 620 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 UBXN2AP68543 259 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 KIAA1644Q3SXP7 199 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 DCAF10Q5QP82 559 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 C16orf54Q6UWD8 224 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 C15orf39Q6ZRI6 1047 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 MFSD6Q6ZSS7 791 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 SH2D5Q6ZV89 423 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 PRPF39Q86UA1 669 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 ZNF595Q8IYB9 648 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 CEP57L1Q8IYX8 460 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 TSPAN14Q8NG11 270 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 CFAP61Q8NHU2 1237 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 HSD17B8Q92506 261 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 NXNL1Q96CM4 212 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 WNT5BQ9H1J7 359 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 ARRDC1-AS1Q9H2J1 176 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 DPP3Q9NY33 737 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 STK26Q9P289 416 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 SWAP70Q9UH65 585 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 TUBE1Q9UJT0 475 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 KCNJ14Q9UNX9 436 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 NME7Q9Y5B8 376 aa4.16□□□□□ -1.74
SMCHD1-204ENST00000581226 KIAA1210Q9ULL0 1709 aa4.15□□□□□ -1.74
SMCHD1-204ENST00000581226 IGLV9-49A0A0B4J1Y8 123 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 MEIS2O14770 477 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 OR10H2O60403 315 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 PIGNO95427 931 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 PAK4O96013 591 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 CD48P09326 243 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 CEACAM8P31997 349 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 RAD52P43351 418 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 KCNJ10P78508 379 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 FAM53AQ6NSI3 398 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 CFAP206Q8IYR0 622 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 ARHGAP24Q8N264 748 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 TRIML1Q8N9V2 468 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 ZNF383Q8NA42 475 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 POMGNT2Q8NAT1 580 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 TRIM58Q8NG06 486 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 OR13J1Q8NGT2 312 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 LGALS12Q96DT0 336 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 SLF1Q9BQI6 1058 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 S1PR5Q9H228 398 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 A4GALTQ9NPC4 353 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 SIX2Q9NPC8 291 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 ANKEF1Q9NU02 776 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 INTS10Q9NVR2 710 aaKnown RBP4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 HAO2Q9NYQ3 351 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 B3GAT1Q9P2W7 334 aa4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 DDX25Q9UHL0 483 aaKnown RBP4.15□□□□□ -1.75
SMCHD1-204ENST00000581226 HHLA1C9JL84 531 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 EDIL3O43854 480 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 PRKRAO75569 313 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 TOMM70O94826 608 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 FRMD6-AS1P0C7T7 363 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 PLA2G4BP0C869 781 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 ITGA3P26006 1051 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 MAP2K2P36507 400 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 ZNF75DP51815 510 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 PDX1P52945 283 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 CALD1Q05682 793 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 HSPB3Q12988 150 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 IL11RAQ14626 422 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 TMEM30BQ3MIR4 351 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 C6orf163Q5TEZ5 329 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 ARHGAP17Q68EM7 881 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 NAA16Q6N069 864 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 ADAM5Q6NVV9 412 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 ARHGAP11AQ6P4F7 1023 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 APLFQ8IW19 511 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 POGLUT1Q8NBL1 392 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 OLIG1Q8TAK6 271 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 FGFBP3Q8TAT2 258 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 GRHL3Q8TE85 626 aa4.14□□□□□ -1.75
SMCHD1-204ENST00000581226 IRGQQ8WZA9 623 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms