RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 ABHD17AQ96GS6 310 aa20.65■□□□□ 0.9
CSNK1D-215ENST00000580784 KLHL25Q9H0H3 589 aa20.65■□□□□ 0.9
CSNK1D-215ENST00000580784 ACTL8Q9H568 366 aa20.65■□□□□ 0.9
CSNK1D-215ENST00000580784 PAK5Q9P286 719 aa20.65■□□□□ 0.9
CSNK1D-215ENST00000580784 RIMKLBQ9ULI2 386 aa20.65■□□□□ 0.9
CSNK1D-215ENST00000580784 SEC16AO15027 2179 aa20.65■□□□□ 0.9
CSNK1D-215ENST00000580784 ASH1LQ9NR48 2969 aaKnown RBP20.64■□□□□ 0.9
CSNK1D-215ENST00000580784 SLC5A10A0PJK1 596 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 BHMG1C9JSJ3 638 aaPredicted RBP20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 QSOX1O00391 747 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 CPNE3O75131 537 aaKnown RBP20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 OR56A5P0C7T3 313 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 PVRP15151 417 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 ACVR1Q04771 509 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 GPS2Q13227 327 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 LYPLAL1Q5VWZ2 237 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 AFTPHQ6ULP2 937 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 ZNF534Q76KX8 674 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 OR4L1Q8NH43 312 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 MR1Q95460 341 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 PITPNM3Q9BZ71 974 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 LATS2Q9NRM7 1088 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 ICKQ9UPZ9 632 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 POLHQ9Y253 713 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 ASF1AQ9Y294 204 aa20.64■□□□□ 0.89
CSNK1D-215ENST00000580784 C2orf74A8MZ97 194 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 RECKO95980 971 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 CCDC175P0C221 793 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 TPBGLP0DKB5 382 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 RPS18P62269 152 aaKnown RBP20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 KCNC4Q03721 635 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 ABRQ12979 859 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 SEMA3AQ14563 771 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 ZNF662Q6ZS27 426 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 NLRP9Q7RTR0 991 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 OR1L3Q8NH93 324 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 TRAPPC9Q96Q05 1148 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 TTC1Q99614 292 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 GPR87Q9BY21 358 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 CHRAC1Q9NRG0 131 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 ACTR10Q9NZ32 417 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 DRG1Q9Y295 367 aaKnown RBP20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 TCAF1Q9Y4C2 921 aa20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 SNRNP200O75643 2136 aaKnown RBP20.63■□□□□ 0.89
CSNK1D-215ENST00000580784 TMEM150CB9EJG8 249 aa20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 PTPN4P29074 926 aa20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 CSE1LP55060 971 aaKnown RBP20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 PRAMEP78395 509 aa20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 KCTD19Q17RG1 926 aaPredicted RBP20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 SYTL3Q4VX76 610 aa20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 FASTKD1Q53R41 847 aaKnown RBP20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 LCN10Q6JVE6 187 aa20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 ZNF517Q6ZMY9 492 aaPredicted RBP20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 UNC5AQ6ZN44 842 aa20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 LDB1Q86U70 411 aaPredicted RBP20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 LRRC8AQ8IWT6 810 aa20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 TBC1D21Q8IYX1 336 aa20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 CLMPQ9H6B4 373 aa20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 FANCEQ9HB96 536 aa20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 FARSAQ9Y285 508 aaKnown RBP20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 TDRKHQ9Y2W6 561 aaKnown RBP20.62■□□□□ 0.89
CSNK1D-215ENST00000580784 FGGP02679 453 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 KLK3P07288 261 aaPredicted RBP20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 CCR7P32248 378 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 KCNJ1P48048 391 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 SESN2P58004 480 aaPredicted RBP20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 RPS15P62841 145 aaKnown RBP20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 ZNF789Q5FWF6 425 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 PLEKHS1Q5SXH7 462 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 DRICH1Q6PGQ1 229 aaPredicted RBP20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 SPESP1Q6UW49 350 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 PPHLN1Q8NEY8 458 aaKnown RBP20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 CPT1BQ92523 772 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 CLIP3Q96DZ5 547 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 SGSM3Q96HU1 749 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 LRFN5Q96NI6 719 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 CHST8Q9H2A9 424 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 SYTL2Q9HCH5 934 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 POLG2Q9UHN1 485 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 PLAGL1Q9UM63 463 aa20.61■□□□□ 0.89
CSNK1D-215ENST00000580784 MEN1O00255 615 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 MAP3K7O43318 606 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 MSL3P1P0C860 447 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 SHMT2P34897 504 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 CSRP3P50461 194 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 CRADDP78560 199 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 PLOD1Q02809 727 aaPredicted RBP20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 TLE1Q04724 770 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 PCID2Q5JVF3 399 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 CDHR3Q6ZTQ4 885 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 GSTA5Q7RTV2 222 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 TRIM73Q86UV7 250 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 OR5K2Q8NHB8 316 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 PEX13Q92968 403 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 OR2A14Q96R47 310 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 EIF2B3Q9NR50 452 aaKnown RBP20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 SPHK1Q9NYA1 384 aa20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 MARCH4Q9P2E8 410 aaPredicted RBP20.6■□□□□ 0.89
CSNK1D-215ENST00000580784 SERTAD3Q9UJW9 196 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms