RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ISLR2Q6UXK2 745 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 DAAM2Q86T65 1068 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 TRIM73Q86UV7 250 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 PQLC3Q8N755 202 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 NR4A3Q92570 626 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 RBM41Q96IZ5 413 aaKnown RBP15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 ZNF830Q96NB3 372 aaPredicted RBP15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 SLC25A51Q9H1U9 297 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 XKR8Q9H6D3 395 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 UBP1Q9NZI7 540 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 LIMA1Q9UHB6 759 aaKnown RBP15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 ANAPC7Q9UJX3 599 aa15.7■□□□□ 0.1
CTDNEP1-211ENST00000575783 LRRC53A6NM62 1247 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 H3BMH7 237 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 SOCS6O14544 535 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 ZSCAN9O15535 394 aaPredicted RBP15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 KLHL18O94889 574 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 PBX1P40424 430 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 ARG2P78540 354 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 PPIDQ08752 370 aaKnown RBP15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 ZDHHC20Q5W0Z9 365 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 KIRREL2Q6UWL6 708 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 AMIGO1Q86WK6 493 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 NIPA2Q8N8Q9 360 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 C19orf47Q8N9M1 422 aaKnown RBP15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 PHC3Q8NDX5 983 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 NACC2Q96BF6 587 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 ZNF670Q9BS34 389 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 CCM2Q9BSQ5 444 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 NDC1Q9BTX1 674 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 SLC22A11Q9NSA0 550 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 ACTR10Q9NZ32 417 aa15.69■□□□□ 0.1
CTDNEP1-211ENST00000575783 A0A1B0GTL3 188 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 CDK11BP21127 795 aaKnown RBP15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 CA7P43166 264 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 TMPRSS15P98073 1019 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 PRKG2Q13237 762 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 MFAP5Q13361 173 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 ITGA9Q13797 1035 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 ZIC1Q15915 447 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 SPESP1Q6UW49 350 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 SHISA6Q6ZSJ9 500 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 CEP97Q8IW35 865 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 MAP7D3Q8IWC1 876 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 OR52E1Q8NGJ3 308 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 DTX3LQ8TDB6 740 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 CHTF18Q8WVB6 975 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 TADA1Q96BN2 335 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 LMF1Q96S06 567 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 PLA2G3Q9NZ20 509 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.68■□□□□ 0.19e-8■■□□□ 13.7
CTDNEP1-211ENST00000575783 IL17CQ9P0M4 197 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 NEU2Q9Y3R4 380 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 HEY1Q9Y5J3 304 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 HS3ST3B1Q9Y662 390 aa15.68■□□□□ 0.1
CTDNEP1-211ENST00000575783 CNTRLQ7Z7A1 2325 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 SKILP12757 684 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 HOXB4P17483 251 aaPredicted RBP15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 KIR3DL1P43629 444 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 TLE4Q04727 773 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 Q0VFX4 171 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 PDK2Q15119 407 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 TUBB8Q3ZCM7 444 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 TLDC1Q6P9B6 456 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 ADGRF3Q8IZF5 1079 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 MMP21Q8N119 569 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 SLC25A41Q8N5S1 370 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 ZNF398Q8TD17 642 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 MTFMTQ96DP5 389 aaKnown RBP15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 TRIM56Q9BRZ2 755 aaKnown RBP15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 ISCUQ9H1K1 167 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 TRABDQ9H4I3 376 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 TFB2MQ9H5Q4 396 aaKnown RBP15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 SEC14L3Q9UDX4 400 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 MYO6Q9UM54 1294 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 FBN3Q75N90 2809 aa15.67■□□□□ 0.1
CTDNEP1-211ENST00000575783 ABCA2Q9BZC7 2435 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 FER1L5A0AVI2 2057 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 DYTNA2CJ06 578 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 KLHL33A6NCF5 533 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 MYO1FO00160 1098 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 GAPDHSO14556 408 aaPredicted RBP15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 PYGMP11217 842 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 ESRRAP11474 423 aaPredicted RBP15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 CD1EP15812 388 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 GABRA4P48169 554 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 CASP6P55212 293 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 KLHL30Q0D2K2 578 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 RBBP7Q16576 425 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 SARM1Q6SZW1 724 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 GLT6D1Q7Z4J2 308 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 CPNE8Q86YQ8 564 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 BLOC1S5Q8TDH9 187 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 THAP2Q9H0W7 228 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 NUP62CLQ9H1M0 184 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 SOX17Q9H6I2 414 aaPredicted RBP15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 GLOD4Q9HC38 313 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 PKP3Q9Y446 797 aa15.66■□□□□ 0.1
CTDNEP1-211ENST00000575783 SPG11Q96JI7 2443 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms