RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PYGMP11217 842 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 ITGA3P26006 1051 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 DCDP81605 110 aaKnown RBP19.19■□□□□ 0.66
CCDC40-206ENST00000572083 SP5Q6BEB4 398 aaPredicted RBP19.19■□□□□ 0.66
CCDC40-206ENST00000572083 RHBDD2Q6NTF9 364 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 C19orf47Q8N9M1 422 aaKnown RBP19.19■□□□□ 0.66
CCDC40-206ENST00000572083 GRHL3Q8TE85 626 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 RNF25Q96BH1 459 aaPredicted RBP19.19■□□□□ 0.66
CCDC40-206ENST00000572083 GBP5Q96PP8 586 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 HGH1Q9BTY7 390 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 SPRTNQ9H040 489 aaPredicted RBP19.19■□□□□ 0.66
CCDC40-206ENST00000572083 ATP13A2Q9NQ11 1180 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 ACTR10Q9NZ32 417 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 KLHL8Q9P2G9 620 aaPredicted RBP19.19■□□□□ 0.66
CCDC40-206ENST00000572083 LCMT1Q9UIC8 334 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 FKBPLQ9UIM3 349 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 NUP210LQ5VU65 1888 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 C2orf74A8MZ97 194 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 H3BMH7 237 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 SRP72O76094 671 aaKnown RBP19.18■□□□□ 0.66
CCDC40-206ENST00000572083 EPOP01588 193 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 PRLHRP49683 370 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 SOX8P57073 446 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 ZBED6P86452 979 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 PRKG2Q13237 762 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 SPESP1Q6UW49 350 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 AMIGO1Q86WK6 493 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 VSIG1Q86XK7 387 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 ADGRF3Q8IZF5 1079 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 PHC3Q8NDX5 983 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 OR4K2Q8NGD2 314 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 TFB1MQ8WVM0 346 aaKnown RBP19.18■□□□□ 0.66
CCDC40-206ENST00000572083 DCUN1D1Q96GG9 259 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 CNDP1Q96KN2 507 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 TFB2MQ9H5Q4 396 aaKnown RBP19.18■□□□□ 0.66
CCDC40-206ENST00000572083 GTF3C3Q9Y5Q9 886 aa19.18■□□□□ 0.66
CCDC40-206ENST00000572083 PECAM1P16284 738 aaPredicted RBP19.17■□□□□ 0.66
CCDC40-206ENST00000572083 ZIC1Q15915 447 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 SARM1Q6SZW1 724 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 FJX1Q86VR8 437 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 HOOK3Q86VS8 718 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 PROKR1Q8TCW9 393 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 PPP4R1Q8TF05 950 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 PTERQ96BW5 349 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 FSD1LQ9BXM9 530 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 OR52A5Q9H2C5 316 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 COG4Q9H9E3 785 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 SLC6A20Q9NP91 592 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 TXLNGQ9NUQ3 528 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 CRLS1Q9UJA2 301 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 AP1M2Q9Y6Q5 423 aa19.17■□□□□ 0.66
CCDC40-206ENST00000572083 AGPSO00116 658 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 IFRD1O00458 451 aaPredicted RBP19.16■□□□□ 0.66
CCDC40-206ENST00000572083 ZSCAN9O15535 394 aaPredicted RBP19.16■□□□□ 0.66
CCDC40-206ENST00000572083 TNNT1P13805 278 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 EDN3P14138 238 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 PDHA2P29803 388 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 PBX1P40424 430 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 CDC16Q13042 620 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 AIMP2Q13155 320 aaKnown RBP19.16■□□□□ 0.66
CCDC40-206ENST00000572083 MPP3Q13368 585 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 NKAIN1Q4KMZ8 207 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 ODF2Q5BJF6 829 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 MRPL14Q6P1L8 145 aaKnown RBP19.16■□□□□ 0.66
CCDC40-206ENST00000572083 ZNF567Q8N184 647 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 ZNF655Q8N720 491 aaPredicted RBP19.16■□□□□ 0.66
CCDC40-206ENST00000572083 DNAJB14Q8TBM8 379 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 FAR1Q8WVX9 515 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 FCRL5Q96RD9 977 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 AP1M1Q9BXS5 423 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 FAM96AQ9H5X1 160 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 IRAK4Q9NWZ3 460 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 FBXL4Q9UKA2 621 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 CAPN11Q9UMQ6 739 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 F8P00451 2351 aa19.16■□□□□ 0.66
CCDC40-206ENST00000572083 ZFHX3Q15911 3703 aa19.15■□□□□ 0.66
CCDC40-206ENST00000572083 KRT38O76015 456 aa19.15■□□□□ 0.66
CCDC40-206ENST00000572083 CD63P08962 238 aa19.15■□□□□ 0.66
CCDC40-206ENST00000572083 RALBP11234 206 aa19.15■□□□□ 0.66
CCDC40-206ENST00000572083 UGT2B7P16662 529 aa19.15■□□□□ 0.66
CCDC40-206ENST00000572083 TSFMP43897 325 aaKnown RBP19.15■□□□□ 0.66
CCDC40-206ENST00000572083 GABRA4P48169 554 aa19.15■□□□□ 0.66
CCDC40-206ENST00000572083 MFSD7Q6UXD7 560 aa19.15■□□□□ 0.66
CCDC40-206ENST00000572083 PID1Q7Z2X4 250 aa19.15■□□□□ 0.66
CCDC40-206ENST00000572083 ZC3H18Q86VM9 953 aaKnown RBP19.15■□□□□ 0.66
CCDC40-206ENST00000572083 FICDQ9BVA6 458 aa19.15■□□□□ 0.66
CCDC40-206ENST00000572083 IGSF5Q9NSI5 407 aa19.15■□□□□ 0.66
CCDC40-206ENST00000572083 ICKQ9UPZ9 632 aa19.15■□□□□ 0.66
CCDC40-206ENST00000572083 LUC7L2Q9Y383 392 aaKnown RBP19.15■□□□□ 0.66
CCDC40-206ENST00000572083 C2orf81A6NN90 581 aa19.14■□□□□ 0.65
CCDC40-206ENST00000572083 AGTP01019 485 aa19.14■□□□□ 0.65
CCDC40-206ENST00000572083 ATP1B2P14415 290 aaPredicted RBP19.14■□□□□ 0.65
CCDC40-206ENST00000572083 NR2C2P49116 596 aa19.14■□□□□ 0.65
CCDC40-206ENST00000572083 TMPRSS15P98073 1019 aa19.14■□□□□ 0.65
CCDC40-206ENST00000572083 XIAPP98170 497 aa19.14■□□□□ 0.65
CCDC40-206ENST00000572083 OLIG2Q13516 323 aa19.14■□□□□ 0.65
CCDC40-206ENST00000572083 ZNF169Q14929 603 aaPredicted RBP19.14■□□□□ 0.65
CCDC40-206ENST00000572083 TAF1AQ15573 450 aaPredicted RBP19.14■□□□□ 0.65
CCDC40-206ENST00000572083 PRAMEF13Q5VWM6 474 aa19.14■□□□□ 0.65
CCDC40-206ENST00000572083 OR13C4Q8NGS5 318 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms