RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	SCYL3	Q8IZE3	742 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	ADGRF2	Q8IZF7	708 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	CPSF7	Q8N684	471 aa	Known RBP	2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	PAPD5	Q8NDF8	572 aa	Known RBP	2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	OR2T11	Q8NH01	316 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	LRRC59	Q96AG4	307 aa	Known RBP	2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	MYADM	Q96S97	322 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	DDO	Q99489	341 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	FUCA2	Q9BTY2	467 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	CLEC7A	Q9BXN2	247 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	WWTR1	Q9GZV5	400 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	SLA2	Q9H6Q3	261 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	PANK3	Q9H999	370 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	HHATL	Q9HCP6	504 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	AASS	Q9UDR5	926 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	CORO1C	Q9ULV4	474 aa	Predicted RBP	2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	MOB4	Q9Y3A3	225 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	ZNF646	O15015	1829 aa	Predicted RBP	2.84	□□□□□ -1.96
UBR1-209	ENST00000569243	RUSC2	Q8N2Y8	1516 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	PGPEP1L	A6NFU8	196 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	DNM1L	O00429	736 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	ZNF197	O14709	1029 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	EPB41L2	O43491	1005 aa	Known RBP	2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	USO1	O60763	962 aa	Known RBP	2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	TPPP	O94811	219 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	MBD4	O95243	580 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	RB1	P06400	928 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	RARG	P13631	454 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	CA6	P23280	308 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	CDH11	P55287	796 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	GSC	P56915	257 aa	Predicted RBP	2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	SNRPE	P62304	92 aa	Known RBP	2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	SP3	Q02447	781 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	HNRNPD	Q14103	355 aa	Known RBP	2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	TAF1B	Q53T94	588 aa	Predicted RBP	2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	GRTP1	Q5TC63	336 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	TMEM198	Q66K66	360 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243		Q6ZR54	194 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	IKBIP	Q70UQ0	350 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	LMNTD2	Q8IXW0	634 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	RAB42	Q8N4Z0	105 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	WDTC1	Q8N5D0	677 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	OR5AP2	Q8NGF4	316 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	UCMA	Q8WVF2	138 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	MTERF3	Q96E29	417 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	NSL1	Q96IY1	281 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	ZNF582	Q96NG8	517 aa	Predicted RBP	2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	GAD1	Q99259	594 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	ABHD6	Q9BV23	337 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	TRIM6	Q9C030	488 aa	Predicted RBP	2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	DNAJC18	Q9H819	358 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	MBNL1	Q9NR56	388 aa	Known RBP	2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	PAG1	Q9NWQ8	432 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	NME7	Q9Y5B8	376 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243	ZNF541	Q9H0D2	1346 aa		2.83	□□□□□ -1.96
UBR1-209	ENST00000569243		A0A1W2PRB8	838 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	PI4KAP2	A4QPH2	592 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	T	O15178	435 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	MITF	O75030	526 aa	Predicted RBP	2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	NXPH2	O95156	264 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	SLC6A6	P31641	620 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	PSMB10	P40306	273 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	DCAF7	P61962	342 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	CXCL9	Q07325	125 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	PNRC1	Q12796	327 aa	Predicted RBP	2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	KCNC3	Q14003	757 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	MELK	Q14680	651 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	NR1D2	Q14995	579 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	HLA-B	Q31612	363 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	FAAH2	Q6GMR7	532 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	KIAA0930	Q6ICG6	404 aa	Predicted RBP	2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	FIP1L1	Q6UN15	594 aa	Known RBP	2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	CHST9	Q7L1S5	443 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	PIGZ	Q86VD9	579 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243		Q8N377	158 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	FBXL16	Q8N461	479 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	DCLK2	Q8N568	766 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	OR1J1	Q8NGS3	322 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	HDAC2	Q92769	488 aa	Known RBP	2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	DAZL	Q92904	295 aa	Known RBP	2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	CEP295NL	Q96MC4	621 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	LRRC61	Q9BV99	259 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	PNMA2	Q9UL42	364 aa		2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	SPIN1	Q9Y657	262 aa	Predicted RBP	2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	SOS1	Q07889	1333 aa	Predicted RBP	2.82	□□□□□ -1.96
UBR1-209	ENST00000569243	LOC101059948	A0A1B0GTJ6	334 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243		A0A1W2PPR1	153 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	LNP1	A1A4G5	178 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	EPM2A	B3EWF7	344 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	RNASEH1	O60930	286 aa	Known RBP	2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	KRTAP1-4	P0C5Y4	121 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	NMBR	P28336	390 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	ENPP2	Q13822	863 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	KRT32	Q14532	448 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	DCAF10	Q5QP82	559 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	HAUS3	Q68CZ6	603 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	CORO6	Q6QEF8	472 aa		2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	INTS8	Q75QN2	995 aa	Known RBP	2.81	□□□□□ -1.96
UBR1-209	ENST00000569243	DNAJC22	Q8N4W6	341 aa		2.81	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms