RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MLIPQ5VWP3 458 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 ITPRIPL1Q6GPH6 555 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 SPESP1Q6UW49 350 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 CDHR3Q6ZTQ4 885 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 DAAM2Q86T65 1068 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 ZC3H18Q86VM9 953 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 NXPE1Q8N323 547 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 ST6GALNAC3Q8NDV1 305 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 OR4K2Q8NGD2 314 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 OR8K1Q8NGG5 319 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 OR52E1Q8NGJ3 308 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 UBE2Q2Q8WVN8 375 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 PPP1R2P1Q96PQ5 205 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 QKIQ96PU8 341 aaKnown RBP eCLIP15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 DNAJC7Q99615 494 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 GBA3Q9H227 469 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 OR52A5Q9H2C5 316 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 COG4Q9H9E3 785 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 ATP13A2Q9NQ11 1180 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 P4HTMQ9NXG6 502 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 ACTR10Q9NZ32 417 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 FKBPLQ9UIM3 349 aa15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 AAR2Q9Y312 384 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 PTRH2Q9Y3E5 179 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-215ENST00000568676 LDB2O43679 373 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 SPOPO43791 374 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 XIAPP98170 497 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 TLDC1Q6P9B6 456 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 RANBP10Q6VN20 620 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 SPOCD1Q6ZMY3 1216 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 SNX20Q7Z614 316 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 LUZP1Q86V48 1076 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 ADGRF3Q8IZF5 1079 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 C19orf47Q8N9M1 422 aaKnown RBP15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 DENND1AQ8TEH3 1009 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 LRRC45Q96CN5 670 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 GBP5Q96PP8 586 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 IFT80Q9P2H3 777 aaPredicted RBP15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 FEZ2Q9UHY8 353 aaPredicted RBP15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 INTUQ9ULD6 942 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 PCDHGA10Q9Y5H3 936 aa15.23■□□□□ 0.03
HERPUD1-215ENST00000568676 CACNA1DQ01668 2161 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 PRRC2CQ9Y520 2896 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 IGLV3-16A0A075B6K0 115 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 H3BMH7 237 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 DDX3YO15523 660 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 KDM1AO60341 852 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 AGTP01019 485 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 TNFRSF8P28908 595 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 SHMT2P34897 504 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 GLRBP48167 497 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 AIMP2Q13155 320 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 BOP1Q14137 746 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 PRPSAP1Q14558 356 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 PTPRCAPQ14761 206 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 CYP2A13Q16696 494 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 KAZNQ674X7 775 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 CAVIN1Q6NZI2 390 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 LILRA3Q8N6C8 439 aaPredicted RBP15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 PPP4R1Q8TF05 950 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 TFGQ92734 400 aaPredicted RBP15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 CCDC42Q96M95 316 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 WDR77Q9BQA1 342 aaPredicted RBP15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 FICDQ9BVA6 458 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 TXLNGQ9NUQ3 528 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 ZDHHC3Q9NYG2 299 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 POLG2Q9UHN1 485 aa15.22■□□□□ 0.03
HERPUD1-215ENST00000568676 F5H423 210 aaPredicted RBP15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 AGPSO00116 658 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 QSOX1O00391 747 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 ZSCAN9O15535 394 aaPredicted RBP15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 HNRNPRO43390 633 aaKnown RBP15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 ZNF189O75820 626 aaPredicted RBP15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 ZRANB2O95218 330 aaKnown RBP eCLIP15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 CBSLP0DN79 551 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 TNNT1P13805 278 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 COMTP21964 271 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 ADRA1AP35348 466 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 CBSP35520 551 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 ZNF658BQ4V348 819 aaPredicted RBP15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 C1QL3Q5VWW1 255 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 MRPL14Q6P1L8 145 aaKnown RBP15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 RCOR2Q8IZ40 523 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 VPS50Q96JG6 964 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 RANBP9Q96S59 729 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 OR6C2Q9NZP2 312 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 IFNKQ9P0W0 207 aa15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.21■□□□□ 0.03
HERPUD1-215ENST00000568676 hCG_1818297A0A087WSY0 165 aa15.2■□□□□ 0.02
HERPUD1-215ENST00000568676 APOC4-APOC2K7ER74 178 aa15.2■□□□□ 0.02
HERPUD1-215ENST00000568676 LIN7AO14910 233 aaPredicted RBP15.2■□□□□ 0.02
HERPUD1-215ENST00000568676 AP2A2O94973 939 aa15.2■□□□□ 0.02
HERPUD1-215ENST00000568676 APOC2P02655 101 aa15.2■□□□□ 0.02
HERPUD1-215ENST00000568676 TPM1P09493 284 aa15.2■□□□□ 0.02
HERPUD1-215ENST00000568676 PIM1P11309 404 aaPredicted RBP15.2■□□□□ 0.02
HERPUD1-215ENST00000568676 PVRP15151 417 aa15.2■□□□□ 0.02
HERPUD1-215ENST00000568676 ELAVL4P26378 380 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-215ENST00000568676 HADHBP55084 474 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-215ENST00000568676 NKAIN1Q4KMZ8 207 aa15.2■□□□□ 0.02
HERPUD1-215ENST00000568676 IRAK1BP1Q5VVH5 260 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms