RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 HOOK3Q86VS8 718 aa13.27□□□□□ -0.29
SMG1-213ENST00000567737 PRIMA1Q86XR5 153 aa13.27□□□□□ -0.29
SMG1-213ENST00000567737 ZNF655Q8N720 491 aaPredicted RBP13.27□□□□□ -0.29
SMG1-213ENST00000567737 LRRN4CLQ8ND94 238 aa13.27□□□□□ -0.29
SMG1-213ENST00000567737 CCDC110Q8TBZ0 833 aa13.27□□□□□ -0.29
SMG1-213ENST00000567737 HAS2Q92819 552 aa13.27□□□□□ -0.29
SMG1-213ENST00000567737 FKBP10Q96AY3 582 aa13.27□□□□□ -0.29
SMG1-213ENST00000567737 SDCCAG3Q96C92 435 aa13.27□□□□□ -0.29
SMG1-213ENST00000567737 TUBGCP2Q9BSJ2 902 aa13.27□□□□□ -0.29
SMG1-213ENST00000567737 ZCCHC2Q9C0B9 1178 aaKnown RBP13.27□□□□□ -0.29
SMG1-213ENST00000567737 SPRTNQ9H040 489 aaPredicted RBP13.27□□□□□ -0.29
SMG1-213ENST00000567737 DEF6Q9H4E7 631 aa13.27□□□□□ -0.29
SMG1-213ENST00000567737 PTGFRNQ9P2B2 879 aa13.27□□□□□ -0.29
SMG1-213ENST00000567737 SHOC2Q9UQ13 582 aa13.27□□□□□ -0.29
SMG1-213ENST00000567737 MRPS2Q9Y399 296 aaKnown RBP13.27□□□□□ -0.29
SMG1-213ENST00000567737 DNMT3AQ9Y6K1 912 aaPredicted RBP13.27□□□□□ -0.29
SMG1-213ENST00000567737 USP1O94782 785 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 C8BP07358 591 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 SLC35G4P0C7Q5 338 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 MYBL2P10244 700 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 UGT1A4P22310 534 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 MIPP30301 263 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 SOX5P35711 763 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 ZNF165P49910 485 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 PCOLCEQ15113 449 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 DEFB110Q30KQ9 67 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 METRNLQ641Q3 311 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 TLDC1Q6P9B6 456 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 Q6ZPB1 254 aaPredicted RBP13.26□□□□□ -0.29
SMG1-213ENST00000567737 TMC3Q7Z5M5 1100 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 SPPL2CQ8IUH8 684 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 LRRC49Q8IUZ0 686 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 DNAAF3Q8N9W5 541 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 ACVR1CQ8NER5 493 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 OR11G2Q8NGC1 345 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 ARRDC2Q8TBH0 407 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 LCN9Q8WX39 176 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 GPR63Q9BZJ6 419 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 XPO4Q9C0E2 1151 aaKnown RBP13.26□□□□□ -0.29
SMG1-213ENST00000567737 SLC6A16Q9GZN6 736 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 CLSTN2Q9H4D0 955 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 WDR54Q9H977 334 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 RBM22Q9NW64 420 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMG1-213ENST00000567737 COQ3Q9NZJ6 369 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 AMACRQ9UHK6 382 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 ZNF835Q9Y2P0 537 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 ZDHHC9Q9Y397 364 aa13.26□□□□□ -0.29
SMG1-213ENST00000567737 C2orf74A8MZ97 194 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 H3BMH7 237 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 BTN3A1O00481 513 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 ZWINTO95229 277 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 MLYCDO95822 493 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 HPP00738 406 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 PIM1P11309 404 aaPredicted RBP13.25□□□□□ -0.29
SMG1-213ENST00000567737 IGFBP2P18065 325 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 MMP16P51512 607 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 CTSCP53634 463 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 NIPAL4Q0D2K0 466 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 TPD52L1Q16890 204 aaPredicted RBP13.25□□□□□ -0.29
SMG1-213ENST00000567737 ATP13A5Q4VNC0 1218 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 TIGD7Q6NT04 549 aaPredicted RBP13.25□□□□□ -0.29
SMG1-213ENST00000567737 TMEM220Q6QAJ8 160 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 CYP4V2Q6ZWL3 525 aaPredicted RBP13.25□□□□□ -0.29
SMG1-213ENST00000567737 HOMEZQ8IX15 550 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 RASGEF1AQ8N9B8 481 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 C19orf47Q8N9M1 422 aaKnown RBP13.25□□□□□ -0.29
SMG1-213ENST00000567737 PHF10Q8WUB8 498 aaKnown RBP13.25□□□□□ -0.29
SMG1-213ENST00000567737 NUDT8Q8WV74 236 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 NLRC4Q9NPP4 1024 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 TMPRSS11EQ9UL52 423 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 ZNF711Q9Y462 761 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 HEBP2Q9Y5Z4 205 aa13.25□□□□□ -0.29
SMG1-213ENST00000567737 OR2AG2A6NM03 316 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 BTN3A3O00478 584 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 MATN3O15232 486 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 F10P00742 488 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 ALBP02768 609 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 PIRTP0C851 137 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 ALAS2P22557 587 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 ADSLP30566 484 aaPredicted RBP13.24□□□□□ -0.29
SMG1-213ENST00000567737 MEOX1P50221 254 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 CACNG1Q06432 222 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 DPYSL2Q16555 572 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 NKG7Q16617 165 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 SLC5A12Q1EHB4 618 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 TMEM198Q66K66 360 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 OVCH1Q7RTY7 1134 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 POLNQ7Z5Q5 900 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 KBTBD2Q8IY47 623 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 EID3Q8N140 333 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 THAP3Q8WTV1 239 aaPredicted RBP13.24□□□□□ -0.29
SMG1-213ENST00000567737 MAML1Q92585 1016 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 DLG3Q92796 817 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMG1-213ENST00000567737 CSPG4P5Q96PW8 444 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 SMR3AQ99954 134 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 SOX17Q9H6I2 414 aaPredicted RBP13.24□□□□□ -0.29
SMG1-213ENST00000567737 ZNF160Q9HCG1 818 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 MAGEE1Q9HCI5 957 aa13.24□□□□□ -0.29
SMG1-213ENST00000567737 FAM60AQ9NP50 221 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms