RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ARGFXA6NJG6 315 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 BTN3A1O00481 513 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 AP2A1O95782 977 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 CDH17Q12864 832 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 MSLNQ13421 630 aaPredicted RBP18.04■□□□□ 0.48
LINC01238-205ENST00000567549 SPARCL1Q14515 664 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 POU6F1Q14863 301 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 PLEKHS1Q5SXH7 462 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 KCTD11Q693B1 232 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 PACS1Q6VY07 963 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 CERS6Q6ZMG9 384 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 TMEM135Q86UB9 458 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 SYTL1Q8IYJ3 562 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 TBC1D21Q8IYX1 336 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 ENDOVQ8N8Q3 282 aaKnown RBP18.04■□□□□ 0.48
LINC01238-205ENST00000567549 DNAAF3Q8N9W5 541 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 FAM71DQ8N9W8 422 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 HGH1Q9BTY7 390 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 CHRNA10Q9GZZ6 450 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 ACTR10Q9NZ32 417 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 OR6C2Q9NZP2 312 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 ASF1AQ9Y294 204 aa18.04■□□□□ 0.48
LINC01238-205ENST00000567549 HEATR9A2RTY3 570 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 E7EVH7 732 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 TMEM63AO94886 807 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 MSNP26038 577 aaKnown RBP18.03■□□□□ 0.48
LINC01238-205ENST00000567549 LMAN1P49257 510 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 CCL11P51671 97 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 RPS18P62269 152 aaKnown RBP18.03■□□□□ 0.48
LINC01238-205ENST00000567549 OLIG2Q13516 323 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 SEL1L2Q5TEA6 688 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 PAPD7Q5XG87 772 aaKnown RBP18.03■□□□□ 0.48
LINC01238-205ENST00000567549 SPESP1Q6UW49 350 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 NLRP9Q7RTR0 991 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 LRRC57Q8N9N7 239 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 GALNT11Q8NCW6 608 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 PROKR1Q8TCW9 393 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 ELMO1Q92556 727 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 ALG3Q92685 438 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 SGSM3Q96HU1 749 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 TRAPPC9Q96Q05 1148 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 FAM118BQ9BPY3 351 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 SLC29A3Q9BZD2 475 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 MRFAP1Q9Y605 127 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 HECTD1Q9ULT8 2610 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 DOPEY2Q9Y3R5 2298 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 NBASA2RRP1 2371 aa18.03■□□□□ 0.48
LINC01238-205ENST00000567549 CCDC78A2IDD5 438 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 GRID2IPA4D2P6 1211 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 ST6GAL1P15907 406 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 NR1D1P20393 614 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 RORAP35398 523 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 FDFT1P37268 417 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 NCF4Q15080 339 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 AARS2Q5JTZ9 985 aaKnown RBP18.02■□□□□ 0.48
LINC01238-205ENST00000567549 PPP1R21Q6ZMI0 780 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 LILRA3Q8N6C8 439 aaPredicted RBP18.02■□□□□ 0.48
LINC01238-205ENST00000567549 C19orf47Q8N9M1 422 aaKnown RBP18.02■□□□□ 0.48
LINC01238-205ENST00000567549 OR1L3Q8NH93 324 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 SLC22A18Q96BI1 424 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 FER1L6-AS2Q96M78 137 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 BAG1Q99933 345 aaPredicted RBP18.02■□□□□ 0.48
LINC01238-205ENST00000567549 PCMTD2Q9NV79 361 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 IMPACTQ9P2X3 320 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 ANAPC5Q9UJX4 755 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 RIMKLBQ9ULI2 386 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 PLAAQ9Y263 795 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 DUSP10Q9Y6W6 482 aa18.02■□□□□ 0.48
LINC01238-205ENST00000567549 BTN3A3O00478 584 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 DNAJB5O75953 348 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 OR2B3O76000 313 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 ALPPP05187 535 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 GP1BBP13224 206 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 PTGIRP43119 386 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 PRKG2Q13237 762 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 IL10RAQ13651 578 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 DBN1Q16643 649 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 TLDC1Q6P9B6 456 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 AFTPHQ6ULP2 937 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 CLDN19Q8N6F1 224 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 PHC3Q8NDX5 983 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 OR5K2Q8NHB8 316 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 GSDMBQ8TAX9 411 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 CPT1CQ8TCG5 803 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 PEX13Q92968 403 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 AP1M1Q9BXS5 423 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 MLXIPLQ9NP71 852 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 TXLNGQ9NUQ3 528 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 IRAK4Q9NWZ3 460 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 GPR83Q9NYM4 423 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 NDOR1Q9UHB4 597 aa18.01■□□□□ 0.47
LINC01238-205ENST00000567549 A0A0J9YY10 115 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 RCCD1A6NED2 376 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 MROH6A6NGR9 719 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 AP3B1O00203 1094 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 PEX12O00623 359 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 CCL22O00626 93 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 ZNF749O43361 778 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 IPO13O94829 963 aaKnown RBP18■□□□□ 0.47
LINC01238-205ENST00000567549 TPH1P17752 444 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms