RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 PLA2G7Q13093 441 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 TRPC3Q13507 836 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 XKR3Q5GH77 459 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 C20orf194Q5TEA3 1177 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 DMKNQ6E0U4 476 aaPredicted RBP1.79□□□□□ -2.12
SMG1-212ENST00000566328 INO80CQ6PI98 192 aaPredicted RBP1.79□□□□□ -2.12
SMG1-212ENST00000566328 PP632Q6XCG6 107 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 KIF6Q6ZMV9 814 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 TSPAN33Q86UF1 283 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 CEP97Q8IW35 865 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 ABHD12Q8N2K0 398 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 NKAPQ8N5F7 415 aaKnown RBP1.79□□□□□ -2.12
SMG1-212ENST00000566328 CPSF7Q8N684 471 aaKnown RBP1.79□□□□□ -2.12
SMG1-212ENST00000566328 MAPKAPK5-AS1Q8N8E1 139 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 SUMF1Q8NBK3 374 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 VANGL1Q8TAA9 524 aaPredicted RBP1.79□□□□□ -2.12
SMG1-212ENST00000566328 MOAP1Q96BY2 351 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 MTERF3Q96E29 417 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 RNF125Q96EQ8 232 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 PDLIM5Q96HC4 596 aaKnown RBP1.79□□□□□ -2.12
SMG1-212ENST00000566328 SDR39U1Q9NRG7 319 aaPredicted RBP1.79□□□□□ -2.12
SMG1-212ENST00000566328 OR6C2Q9NZP2 312 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 B4GALT7Q9UBV7 327 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 TSPYL4Q9UJ04 414 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 CCDC88BA6NC98 1476 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 AQRO60306 1485 aaKnown RBP eCLIP1.79□□□□□ -2.12
SMG1-212ENST00000566328 SMARCA2P51531 1590 aa1.79□□□□□ -2.12
SMG1-212ENST00000566328 ARHGEF40Q8TER5 1519 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 ZNF608Q9ULD9 1512 aaPredicted RBP1.78□□□□□ -2.12
SMG1-212ENST00000566328 PDS5BQ9NTI5 1447 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 TDRD9Q8NDG6 1382 aaKnown RBP1.78□□□□□ -2.12
SMG1-212ENST00000566328 KDM3AQ9Y4C1 1321 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 A8MXK9 166 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 EIF3FO00303 357 aaPredicted RBP1.78□□□□□ -2.12
SMG1-212ENST00000566328 HPP00738 406 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 HOXD4P09016 255 aaPredicted RBP1.78□□□□□ -2.12
SMG1-212ENST00000566328 ACTN1P12814 892 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 GPR143P51810 404 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 RPL7AP62424 266 aaKnown RBP1.78□□□□□ -2.12
SMG1-212ENST00000566328 GOLGA8DPQ0D2H9 430 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 PDLIM3Q53GG5 364 aaPredicted RBP1.78□□□□□ -2.12
SMG1-212ENST00000566328 KHDRBS2Q5VWX1 349 aaKnown RBP1.78□□□□□ -2.12
SMG1-212ENST00000566328 BAIAP2L2Q6UXY1 529 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 CEACAM19Q7Z692 300 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 SLC25A42Q86VD7 318 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 GALNT13Q8IUC8 556 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 METTL4Q8N3J2 472 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 NPRL2Q8WTW4 380 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 INTS12Q96CB8 462 aaKnown RBP1.78□□□□□ -2.12
SMG1-212ENST00000566328 HVCN1Q96D96 273 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 SLA2Q9H6Q3 261 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 HEXA-AS1Q9H8Q6 139 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 PPANQ9NQ55 473 aaKnown RBP1.78□□□□□ -2.12
SMG1-212ENST00000566328 PCDHB16Q9NRJ7 776 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 CTSZQ9UBR2 303 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 OSGIN1Q9UJX0 560 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 ZNF510Q9Y2H8 683 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 KIF25-AS1Q9Y6Z4 181 aa1.78□□□□□ -2.12
SMG1-212ENST00000566328 KIF21AQ7Z4S6 1674 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 BAZ1AQ9NRL2 1556 aaPredicted RBP1.77□□□□□ -2.13
SMG1-212ENST00000566328 FANCD2Q9BXW9 1451 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 RAD54L2Q9Y4B4 1467 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 LOC105371242A0A075B767 164 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 TFECO14948 347 aaPredicted RBP1.77□□□□□ -2.13
SMG1-212ENST00000566328 NDUFS4O43181 175 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 CCNDBP1O95273 360 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 HLA-FP30511 346 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 FCHO2Q0JRZ9 810 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 OS9Q13438 667 aaPredicted RBP1.77□□□□□ -2.13
SMG1-212ENST00000566328 DLG2Q15700 870 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 C3AR1Q16581 482 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 KLHL26Q53HC5 615 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 ZNF841Q6ZN19 808 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 ARMC8Q8IUR7 673 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 AQP11Q8NBQ7 271 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 GPRC5AQ8NFJ5 357 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 CHPT1Q8WUD6 406 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 B3GALT6Q96L58 329 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 ZNF582Q96NG8 517 aaPredicted RBP1.77□□□□□ -2.13
SMG1-212ENST00000566328 ZIM3Q96PE6 472 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 SLC22A12Q96S37 553 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 ABHD6Q9BV23 337 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 HHATLQ9HCP6 504 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 A4GALTQ9NPC4 353 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 FGF21Q9NSA1 209 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 TAS2R10Q9NYW0 307 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 VSIG4Q9Y279 399 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 CYP46A1Q9Y6A2 500 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 CSNK1G3Q9Y6M4 447 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
SMG1-212ENST00000566328 URB2Q14146 1524 aaKnown RBP1.76□□□□□ -2.13
SMG1-212ENST00000566328 TMEM129A0AVI4 362 aa1.76□□□□□ -2.13
SMG1-212ENST00000566328 TRIM49BA6NDI0 452 aa1.76□□□□□ -2.13
SMG1-212ENST00000566328 GH2P01242 217 aa1.76□□□□□ -2.13
SMG1-212ENST00000566328 TMEM11P17152 192 aa1.76□□□□□ -2.13
SMG1-212ENST00000566328 KLK2P20151 261 aa1.76□□□□□ -2.13
SMG1-212ENST00000566328 ACADLP28330 430 aa1.76□□□□□ -2.13
SMG1-212ENST00000566328 SLC6A6P31641 620 aa1.76□□□□□ -2.13
SMG1-212ENST00000566328 HALP42357 657 aa1.76□□□□□ -2.13
SMG1-212ENST00000566328 PDX1P52945 283 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms