RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 CDKN1BP46527 198 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 ERFP50548 548 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 GSCP56915 257 aaPredicted RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 UBE2IP63279 158 aaKnown RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 PPP2R2BQ00005 443 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 REEP5Q00765 189 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 B4GALNT1Q00973 533 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 RASGEF1BQ0VAM2 473 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 ZNF273Q14593 569 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 FAM160B1Q5W0V3 765 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 ATG9BQ674R7 924 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TMEM211Q6ICI0 200 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 SPOPLQ6IQ16 392 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 FBXO42Q6P3S6 717 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 BRAT1Q6PJG6 821 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 USP17L6PQ6QN14 398 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 METAP1DQ6UB28 335 aaPredicted RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 BZW1Q7L1Q6 419 aaKnown RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 DCXRQ7Z4W1 244 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 IRF2BP1Q8IU81 584 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 APLFQ8IW19 511 aaPredicted RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 C11orf65Q8NCR3 313 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 CYB5D2Q8WUJ1 264 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 FIG4Q92562 907 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 WDR89Q96FK6 387 aaPredicted RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 MARK4Q96L34 752 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 LRRC37BQ96QE4 947 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TEKT3Q9BXF9 490 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 LSG1Q9H089 658 aaKnown RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 RGCCQ9H4X1 137 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 ACTL8Q9H568 366 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 NOL11Q9H8H0 719 aaKnown RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 PIDD1Q9HB75 910 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 ZC4H2Q9NQZ6 224 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 KLHL1Q9NR64 748 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 PXMP2Q9NR77 195 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 ARL8BQ9NVJ2 186 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 PRMT7Q9NVM4 692 aaPredicted RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 IFNKQ9P0W0 207 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 CTTNBP2NLQ9P2B4 639 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 C3orf18Q9UK00 162 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 GAB2Q9UQC2 676 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 MRPS7Q9Y2R9 242 aaKnown RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 U3KQV3 271 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TBC1D3DA0A087WVF3 549 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TBC1D3IA0A087WXS9 549 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TBC1D3EA0A087X179 549 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TBC1D3KA0A087X1G2 549 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TBC1D3BA6NDS4 549 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TBC1D3FA6NER0 549 aaPredicted RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 TBC1D3LB9A6J9 549 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TLR4O00206 839 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 FOXP2O15409 715 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 MAGEB2O15479 319 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TBX19O60806 448 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 PFDN1O60925 122 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TULP3O75386 442 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TAF5LO75529 589 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 DNAJB5O75953 348 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 ZNF202O95125 648 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 DDAH2O95865 285 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 CHEK2O96017 543 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 GH1P01241 217 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 GRPP07492 148 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TBC1D3HP0C7X1 549 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 PNMA6AP0CW24 399 aaPredicted RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 POLR2EP19388 210 aaKnown RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 RYKP34925 604 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 ATP5C1P36542 298 aaKnown RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 GPR4P46093 362 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 CEBPGP53567 150 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 CRYBB1P53674 252 aaPredicted RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 CDH13P55290 713 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 UBE2G2P60604 165 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 KRT76Q01546 638 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 LRRC63Q05C16 580 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 NAB2Q15742 525 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 MAPK6Q16659 721 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 DECR1Q16698 335 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 KLHL22Q53GT1 634 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 SPDYAQ5MJ70 313 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 PRAMEF18Q5VWM3 479 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TBC1D3GQ6DHY5 549 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TBC1D3CQ6IPX1 549 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 SEZ6L2Q6UXD5 910 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 RIPOR1Q6ZS17 1223 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 BBS12Q6ZW61 710 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 FRMD5Q7Z6J6 570 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 DCUN1D3Q8IWE4 304 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 ARHGAP12Q8IWW6 846 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TBC1D3Q8IZP1 549 aaPredicted RBP3.02□□□□□ -1.93
CHD9-216ENST00000565803 GHDCQ8N2G8 530 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TOP6BLQ8N6T0 577 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 ZNF781Q8N8C0 355 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 KREMEN2Q8NCW0 462 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 DNAAF1Q8NEP3 725 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 TMEM185AQ8NFB2 350 aa3.02□□□□□ -1.93
CHD9-216ENST00000565803 OR10H5Q8NGA6 315 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms