RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 LHX8Q68G74 356 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PELI3Q8N2H9 469 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 RTL3Q8N8U3 475 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 ATG16L2Q8NAA4 619 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 TRPV3Q8NET8 790 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ACOX2Q99424 681 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MCMBPQ9BTE3 642 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 KLHL25Q9H0H3 589 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MEPEQ9NQ76 525 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 MORF4L1Q9UBU8 362 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 EGFL7Q9UHF1 273 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PCDHB1Q9Y5F3 818 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 TEX13CA0A0J9YWL9 993 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 GRXCR2A6NFK2 248 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 GJE1A6NN92 205 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 LZTS3O60299 673 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 NRP2O60462 931 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SEC24DO94855 1032 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 TPBGLP0DKB5 382 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CPA3P15088 417 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CCR1P32246 355 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MNDAP41218 407 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PPIGQ13427 754 aaKnown RBP eCLIP3.3□□□□□ -1.88
CHD9-213ENST00000564845 PCBP2Q15366 365 aaKnown RBP eCLIP3.3□□□□□ -1.882e-9■■■■■ 41.9
CHD9-213ENST00000564845 TAZQ16635 292 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ANKRD26P1Q6NSI1 321 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 TRIM40Q6P9F5 258 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 DNAJC14Q6Y2X3 702 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 TMC7Q7Z402 723 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 HDAC10Q969S8 669 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MTG1Q9BT17 334 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 ILKAPQ9H0C8 392 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 DZANK1Q9NVP4 752 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ZNHIT2Q9UHR6 403 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SLC33A1O00400 549 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 UBFD1O14562 309 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 SYN3O14994 580 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 NARSO43776 548 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 CLIC3O95833 236 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 FTH1P02794 183 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 RB1P06400 928 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CCNB1P14635 433 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 NR4A2P43354 598 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MAGEA10P43363 369 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 SCRN3Q0VDG4 424 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SNTA1Q13424 505 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CARTPTQ16568 116 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 TYSND1Q2T9J0 566 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SAMD4BQ5PRF9 694 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 GALNT4Q8N4A0 578 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 WDR36Q8NI36 951 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 TSPEARQ8WU66 669 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ROPN1LQ96C74 230 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ZNF599Q96NL3 588 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 TTLL2Q9BWV7 592 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SAV1Q9H4B6 383 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 MANSC1Q9H8J5 431 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CLK4Q9HAZ1 481 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 POPDC2Q9HBU9 364 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SSU72Q9NP77 194 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 EIF2B3Q9NR50 452 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 TMEM39AQ9NV64 488 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 GTSE1Q9NYZ3 720 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PPARGC1AQ9UBK2 798 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 SAMD4AQ9UPU9 718 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 TPD52L2O43399 206 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 MFN2O95140 757 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 OTCP00480 354 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 C8BP07358 591 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 HBQ1P09105 142 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PKMP14618 531 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 NAGLUP54802 743 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 AP1S1P61966 158 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 NFKB2Q00653 900 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CAMK2DQ13557 499 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 NRF1Q16656 503 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 INTS6LQ5JSJ4 861 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 TBC1D21Q8IYX1 336 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 LPCAT1Q8NF37 534 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 BPIFB6Q8NFQ5 453 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 HSFY1Q96LI6 401 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MIPEPQ99797 713 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ZPBPQ9BS86 351 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PCDHAC1Q9H158 963 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ALG2Q9H553 416 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SP110Q9HB58 689 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 FARSBQ9NSD9 589 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 GPATCH2Q9NW75 528 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SLAMF8Q9P0V8 285 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 C19orf25Q9UFG5 118 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 PSMD13Q9UNM6 376 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SLC27A6Q9Y2P4 619 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 TRPV2Q9Y5S1 764 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 NSG1A0A0A6YYJ2 146 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 FAM149AA5PLN7 773 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 TRIM43BA6NCK2 446 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SERPINI2O75830 405 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 KRT36O76013 467 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 BAIAP3O94812 1187 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 OR56A5P0C7T3 313 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms