RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 TNFRSF12AQ9NP84 129 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 POLMQ9NP87 494 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 MRPS17Q9Y2R5 130 aaKnown RBP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 TBC1D3DA0A087WVF3 549 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 TBC1D3IA0A087WXS9 549 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 TBC1D3EA0A087X179 549 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 TBC1D3KA0A087X1G2 549 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 TBC1D3FA6NER0 549 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-210ENST00000564587 LRRC72A6NJI9 287 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 TBC1D3LB9A6J9 549 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 KMOO15229 486 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 JUNP05412 331 aaKnown RBP15.2■□□□□ 0.02
COMMD4-210ENST00000564587 ASGR2P07307 311 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 TBC1D3HP0C7X1 549 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 MYCLP1P12525 358 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-210ENST00000564587 HGFP14210 728 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 LBPP18428 481 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 LRRC32Q14392 662 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 NAA25Q14CX7 972 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 IRF4Q15306 451 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 MLF2Q15773 248 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-210ENST00000564587 TBC1D3GQ6DHY5 549 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 TBC1D3CQ6IPX1 549 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 PTCRAQ6ISU1 281 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-210ENST00000564587 UNC5DQ6UXZ4 953 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 SPATA19Q7Z5L4 167 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 AMZ2Q86W34 360 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 DDIASQ8IXT1 998 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 KLHDC8AQ8IYD2 350 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 CFAP206Q8IYR0 622 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 TBC1D3Q8IZP1 549 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-210ENST00000564587 OXR1Q8N573 874 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 PLA2G15Q8NCC3 412 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 METTL6Q8TCB7 284 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 ERLEC1Q96DZ1 483 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 MRGPRX1Q96LB2 322 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 PPP1R36Q96LQ0 422 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 SLC29A3Q9BZD2 475 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 ZNF385DQ9H6B1 395 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 SGK2Q9HBY8 427 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 TRPS1Q9UHF7 1281 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 ZFR2Q9UPR6 939 aaKnown RBP15.2■□□□□ 0.02
COMMD4-210ENST00000564587 MYO10Q9HD67 2058 aa15.2■□□□□ 0.02
COMMD4-210ENST00000564587 B2RBV5 119 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 PPP6CO00743 305 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 OR7A17O14581 309 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 PIP5K1BO14986 540 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 NARSO43776 548 aaKnown RBP15.19■□□□□ 0.02
COMMD4-210ENST00000564587 OR4F21O95013 312 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 PAK4O96013 591 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-210ENST00000564587 RPN2P04844 631 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 FOSL2P15408 326 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 PCSK2P16519 638 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 HMOX2P30519 316 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 ARL1P40616 181 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-210ENST00000564587 SLC6A12P48065 614 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 DGKEP52429 567 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 STX1BP61266 288 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 ABRQ12979 859 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 GRIK2Q13002 908 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 TRAF3Q13114 568 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 INPP5AQ14642 412 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 OGFOD2Q6N063 350 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 TRIM74Q86UV6 250 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 TRIM69Q86WT6 500 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 ESAMQ96AP7 390 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 KLC4Q9NSK0 619 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 DNAJC11Q9NVH1 559 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 TMEM45AQ9NWC5 275 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 DUSP12Q9UNI6 340 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 ATG2BQ96BY7 2078 aa15.19■□□□□ 0.02
COMMD4-210ENST00000564587 MUC3AQ02505 3323 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 TMEM202A6NGA9 273 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 CHURC1-FNTBB4DL54 471 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 LOC730098B7Z3J9 87 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 CACNB4O00305 520 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-210ENST00000564587 TOR1BO14657 336 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 UGDHO60701 494 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 COX4I1P13073 169 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 PIK3R1P27986 724 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 PBLDP30039 288 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-210ENST00000564587 ERVPABLB-1P60509 514 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 ZNF33BQ06732 778 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 GSTA3Q16772 222 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 SMU1Q2TAY7 513 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 GGTA1PQ4G0N0 100 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 FBXO48Q5FWF7 155 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 KIAA1324Q6UXG2 1013 aaKnown RBP15.18■□□□□ 0.02
COMMD4-210ENST00000564587 ZNF547Q8IVP9 402 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 OR4F6Q8NGB9 312 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 OR2T34Q8NGX1 318 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 MCUR1Q96AQ8 359 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 TUBGCP3Q96CW5 907 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 SHDQ96IW2 340 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 CATSPER2Q96P56 530 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 RTKNQ9BST9 563 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 TBC1D10AQ9BXI6 508 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 BTBD1Q9H0C5 482 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 RASSF4Q9H2L5 321 aa15.18■□□□□ 0.02
COMMD4-210ENST00000564587 AKTIPQ9H8T0 292 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms