RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 CFAP99D6REC4 459 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 E7EQ34 232 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 PJA2O43164 708 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 DPM1O60762 260 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 KLF7O75840 302 aaPredicted RBP16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 CTSBP07858 339 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 CBSLP0DN79 551 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 RBP3P10745 1247 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 ACRV1P26436 265 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 CTNNA1P35221 906 aaKnown RBP16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 CBSP35520 551 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 HADHAP40939 763 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 CD151P48509 253 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 COPS2P61201 443 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 BOP1Q14137 746 aaKnown RBP16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 PRPSAP1Q14558 356 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 ZIC1Q15915 447 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 EIF2S3LQ2VIR3 472 aaKnown RBP16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 CCDC181Q5TID7 509 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 MED25Q71SY5 747 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 TRIM73Q86UV7 250 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 SERPINA9Q86WD7 417 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 AMIGO1Q86WK6 493 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 CDKL3Q8IVW4 592 aaPredicted RBP16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 TMEM151BQ8IW70 566 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 PIANPQ8IYJ0 282 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 CLDN19Q8N6F1 224 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 TMEM102Q8N9M5 508 aaPredicted RBP16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 C19orf60Q96EN9 201 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 SPATA13Q96N96 652 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 SMAD5Q99717 465 aaKnown RBP16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 C19orf43Q9BQ61 176 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 OSBPL8Q9BZF1 889 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 MVB12BQ9H7P6 319 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 ICKQ9UPZ9 632 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 PCDHA3Q9Y5H8 950 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 ESPL1Q14674 2120 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 FER1L5A0AVI2 2057 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 MACROD2A1Z1Q3 448 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 RCCD1A6NED2 376 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 C2orf74A8MZ97 194 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 IFRD1O00458 451 aaPredicted RBP16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 TPBGLP0DKB5 382 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 GABRA4P48169 554 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 FOXL2P58012 376 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 DEFB110Q30KQ9 67 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 GPR33Q49SQ1 333 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 ZRANB3Q5FWF4 1079 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 KCTD11Q693B1 232 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 DARS2Q6PI48 645 aaKnown RBP16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 SPESP1Q6UW49 350 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 FLVCR1-AS1Q8TAF5 88 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 HEXDCQ8WVB3 486 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 TFGQ92734 400 aaPredicted RBP16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 GPR83Q9NYM4 423 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 EFR3BQ9Y2G0 817 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 PRSS21Q9Y6M0 314 aa16.25■□□□□ 0.19
HDGFL3-203ENST00000563404 H7C0S8 307 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 MASP2O00187 686 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 KRT86O43790 486 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 TPH1P17752 444 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 OTX2P32243 289 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 PTPN7P35236 360 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 RPA4Q13156 261 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 DBN1Q16643 649 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 PLEKHN1Q494U1 663 aaPredicted RBP16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 OR5AR1Q8NGP9 310 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 ALG3Q92685 438 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 PNPLA2Q96AD5 504 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 OR2A14Q96R47 310 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 DPH2Q9BQC3 489 aaPredicted RBP16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 SLC7A5P2Q9GIP4 190 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 SPRTNQ9H040 489 aaPredicted RBP16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 SLAMF7Q9NQ25 335 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 NLE1Q9NVX2 485 aaPredicted RBP16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 SPHK1Q9NYA1 384 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 DUSP10Q9Y6W6 482 aa16.24■□□□□ 0.19
HDGFL3-203ENST00000563404 A1L4Q6 167 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 CNOT3O75175 753 aaKnown RBP16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 METTL18O95568 372 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 UGT2B7P16662 529 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 RRADP55042 308 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 C1orf189Q5VU69 101 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 NAPRTQ6XQN6 538 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 UNC5AQ6ZN44 842 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 TAS2R42Q7RTR8 314 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 MRGPREQ86SM8 312 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 RAB43Q86YS6 212 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 HPS6Q86YV9 775 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 C19orf47Q8N9M1 422 aaKnown RBP16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 CDKN2AIPNLQ96HQ2 116 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 GBP5Q96PP8 586 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 CASS4Q9NQ75 786 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 CUEDC1Q9NWM3 386 aaPredicted RBP16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 FEZ2Q9UHY8 353 aaPredicted RBP16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 HIVEP3Q5T1R4 2406 aa16.23■□□□□ 0.19
HDGFL3-203ENST00000563404 OR51F1A6NGY5 319 aa16.22■□□□□ 0.19
HDGFL3-203ENST00000563404 C9J4A7 227 aa16.22■□□□□ 0.19
HDGFL3-203ENST00000563404 MAP3K7O43318 606 aa16.22■□□□□ 0.19
HDGFL3-203ENST00000563404 STK10O94804 968 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms