RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PDHA2P29803 388 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 HADHBP55084 474 aaKnown RBP12.58□□□□□ -0.4
SF3B3-202ENST00000562722 SPA17Q15506 151 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 GPR33Q49SQ1 333 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 ZNF789Q5FWF6 425 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 C1orf189Q5VU69 101 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 MLIPQ5VWP3 458 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 CDHR3Q6ZTQ4 885 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 TRIM73Q86UV7 250 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 RNF214Q8ND24 703 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 CCDC110Q8TBZ0 833 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 TFGQ92734 400 aaPredicted RBP12.58□□□□□ -0.4
SF3B3-202ENST00000562722 PNPLA2Q96AD5 504 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 DNAJC1Q96KC8 554 aaKnown RBP12.58□□□□□ -0.4
SF3B3-202ENST00000562722 PPP1R2P1Q96PQ5 205 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 C17orf62Q9BQA9 187 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 DPH2Q9BQC3 489 aaPredicted RBP12.58□□□□□ -0.4
SF3B3-202ENST00000562722 OR52A5Q9H2C5 316 aa12.58□□□□□ -0.4
SF3B3-202ENST00000562722 TFB2MQ9H5Q4 396 aaKnown RBP12.58□□□□□ -0.4
SF3B3-202ENST00000562722 LUC7LQ9NQ29 371 aaKnown RBP12.58□□□□□ -0.4
SF3B3-202ENST00000562722 AGAP14A8MT82 685 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 PEX12O00623 359 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 OR2B3O76000 313 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 ALPPP05187 535 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 CAPN1P07384 714 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 MSL3P1P0C860 447 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 PTMSP20962 102 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 ACRV1P26436 265 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 CETN2P41208 172 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 FOLR3P41439 243 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 CD151P48509 253 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 CDKN1CP49918 316 aaPredicted RBP12.57□□□□□ -0.4
SF3B3-202ENST00000562722 NAP1L1P55209 391 aaKnown RBP12.57□□□□□ -0.4
SF3B3-202ENST00000562722 COPS2P61201 443 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 DEFB110Q30KQ9 67 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 VWA5B1Q5TIE3 1220 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 SPESP1Q6UW49 350 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 SERPINA9Q86WD7 417 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 CLDN19Q8N6F1 224 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 RBMXL3Q8N7X1 1067 aaKnown RBP12.57□□□□□ -0.4
SF3B3-202ENST00000562722 C19orf47Q8N9M1 422 aaKnown RBP12.57□□□□□ -0.4
SF3B3-202ENST00000562722 Q8NA96 180 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 GLIS1Q8NBF1 620 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 CLEC1AQ8NC01 280 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 SPATA13Q96N96 652 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 ALS2CR12Q96Q35 445 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 DHRS4Q9BTZ2 278 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 CUEDC1Q9NWM3 386 aaPredicted RBP12.57□□□□□ -0.4
SF3B3-202ENST00000562722 NDOR1Q9UHB4 597 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 PTRH2Q9Y3E5 179 aaKnown RBP12.57□□□□□ -0.4
SF3B3-202ENST00000562722 PCDHA13Q9Y5I0 950 aa12.57□□□□□ -0.4
SF3B3-202ENST00000562722 USP9XQ93008 2570 aaPredicted RBP12.56□□□□□ -0.4
SF3B3-202ENST00000562722 PJA2O43164 708 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 KRT86O43790 486 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 PRSS56P0CW18 603 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 RNF224P0DH78 156 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 CBSLP0DN79 551 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 SHMT2P34897 504 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 CBSP35520 551 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 RPA4Q13156 261 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 BOP1Q14137 746 aaKnown RBP12.56□□□□□ -0.4
SF3B3-202ENST00000562722 SLC9A5Q14940 896 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 BRD3Q15059 726 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 NR6A1Q15406 480 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 SYTL3Q4VX76 610 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 LYPLAL1Q5VWZ2 237 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 ARHGEF18Q6ZSZ5 1173 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 MICALCLQ6ZW33 695 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 MRGPREQ86SM8 312 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 ADGRF3Q8IZF5 1079 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 IQCKQ8N0W5 287 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 OR5AR1Q8NGP9 310 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 ELMO1Q92556 727 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.56□□□□□ -0.4
SF3B3-202ENST00000562722 C19orf60Q96EN9 201 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 TCTN2Q96GX1 697 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 FER1L6-AS2Q96M78 137 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 IP6K3Q96PC2 410 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 SMAD5Q99717 465 aaKnown RBP12.56□□□□□ -0.4
SF3B3-202ENST00000562722 OSBPL8Q9BZF1 889 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 ILKAPQ9H0C8 392 aaPredicted RBP12.56□□□□□ -0.4
SF3B3-202ENST00000562722 TSPY26PQ9H489 355 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 TXLNGQ9NUQ3 528 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 SMARCAL1Q9NZC9 954 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 IFT80Q9P2H3 777 aaPredicted RBP12.56□□□□□ -0.4
SF3B3-202ENST00000562722 FEZ2Q9UHY8 353 aaPredicted RBP12.56□□□□□ -0.4
SF3B3-202ENST00000562722 ICKQ9UPZ9 632 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 ASF1AQ9Y294 204 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 TDRKHQ9Y2W6 561 aaKnown RBP12.56□□□□□ -0.4
SF3B3-202ENST00000562722 AP1M2Q9Y6Q5 423 aa12.56□□□□□ -0.4
SF3B3-202ENST00000562722 IGLV3-16A0A075B6K0 115 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 DDAH2O95865 285 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 GSTM1P09488 218 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 UGT2B7P16662 529 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 TPH1P17752 444 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 CTNNA1P35221 906 aaKnown RBP12.55□□□□□ -0.4
SF3B3-202ENST00000562722 DCDP81605 110 aaKnown RBP12.55□□□□□ -0.4
SF3B3-202ENST00000562722 GSTM4Q03013 218 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 CACNG1Q06432 222 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 SSPNQ14714 243 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms