RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 KLHL38Q2WGJ6 581 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 TTLL9Q3SXZ7 439 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 FAM153CQ494X1 144 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 ACSBG2Q5FVE4 666 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 GRTP1Q5TC63 336 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 DUS1LQ6P1R4 473 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 RBM44Q6ZP01 1051 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 CAPN12Q6ZSI9 719 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 TMPRSS9Q7Z410 1059 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 CNPY4Q8N129 248 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 Q8N9G6 341 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 SIDT2Q8NBJ9 832 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 FBXO15Q8NCQ5 510 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 PHC3Q8NDX5 983 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 ANKRD7Q92527 254 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 UBXN4Q92575 508 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 VPS39Q96JC1 886 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 TMEM74Q96NL1 305 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 CYTH2Q99418 400 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 GPR22Q99680 433 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 OLFM1Q99784 485 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 MENTQ9BUN1 341 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 TBC1D10AQ9BXI6 508 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 TRIT1Q9H3H1 467 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 ASF1AQ9Y294 204 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 MSRB2Q9Y3D2 182 aa9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 CFAP20Q9Y6A4 193 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-221ENST00000561055 KMT2BQ9UMN6 2715 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 CACNA1BQ00975 2339 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 A0A087WUV0 522 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 FAM95CA0A1B0GW59 222 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 HYAL3O43820 417 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 KDM1AO60341 852 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 C1orf105O95561 183 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 TSPAN12O95859 305 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 PROS1P07225 676 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 TUBBP07437 444 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 HOXB3P14651 431 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 JUPP14923 745 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 CSF2RBP32927 897 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 CCNFP41002 786 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 CAPZBP47756 277 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 RGS4P49798 205 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 CSRP3P50461 194 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 PMS2P54278 862 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 TAS2R39P59534 338 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 FOXC1Q12948 553 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 ABRQ12979 859 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 KRT33BQ14525 404 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 CCDC157Q569K6 752 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 KLHL35Q6PF15 583 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 PAQR3Q6TCH7 311 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 USP53Q70EK8 1073 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 ZNF761Q86XN6 746 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 PLXDC1Q8IUK5 500 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 DCUN1D3Q8IWE4 304 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 CTAGE3PQ8IX95 158 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 CARFQ8N187 725 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 PPM1NQ8N819 430 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 OR52E1Q8NGJ3 308 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 OR5AR1Q8NGP9 310 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 MAGEC3Q8TD91 643 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 ASB11Q8WXH4 323 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 RAD51AP1Q96B01 352 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 LIN37Q96GY3 246 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 AHCYL2Q96HN2 611 aaKnown RBP9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 FOPNLQ96NB1 174 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 NDNQ99608 321 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 SCNM1Q9BWG6 230 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 EPB41L4BQ9H329 900 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 SYTL2Q9HCH5 934 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 OR6C2Q9NZP2 312 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 TXNDC16Q9P2K2 825 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 FETUBQ9UGM5 382 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 TRMT6Q9UJA5 497 aaKnown RBP9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 RAB21Q9UL25 225 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 MTO1Q9Y2Z2 717 aaKnown RBP9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 ENTPD2Q9Y5L3 495 aa9.36□□□□□ -0.91
RABGGTA-221ENST00000561055 IGHV5-10-1A0A0J9YXX1 117 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 MED19A0JLT2 244 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 OR5K3A6NET4 321 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 MATN2O00339 956 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 HGSO14964 777 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 SEC16AO15027 2179 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 SLC16A5O15375 505 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 RIPK2O43353 540 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 CSO75390 466 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 PIAS1O75925 651 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 ACSL3O95573 720 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 TOP3BO95985 862 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 ANKRD34CP0C6C1 535 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 THRAP10827 490 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 ERGP11308 486 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 ZNF37AP17032 561 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 AMD1P17707 334 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 KCNA4P22459 653 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 MCM3P25205 808 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 SHMT2P34897 504 aa9.35□□□□□ -0.91
RABGGTA-221ENST00000561055 ABCG1P45844 678 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms