RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 FAM60AQ9NP50 221 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 SLC22A11Q9NSA0 550 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 DHCR7Q9UBM7 475 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 AP1M2Q9Y6Q5 423 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 COLEC10Q9Y6Z7 277 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 SOCS6O14544 535 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 GAPDHSO14556 408 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 KCNN4O15554 427 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 NDST3O95803 873 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 MT-CYBP00156 380 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 SLC35G4P0C7Q5 338 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 MYBL1P10243 752 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 HOXB4P17483 251 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 CAPN3P20807 821 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 MMP11P24347 488 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 GABRA4P48169 554 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 PPIDQ08752 370 aaKnown RBP12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 DEFB110Q30KQ9 67 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 NKAIN1Q4KMZ8 207 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 FAM151BQ6UXP7 276 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 GFRALQ6UXV0 394 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 RPTNQ6XPR3 784 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 DET1Q7L5Y6 550 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 NT5DC3Q86UY8 548 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 LILRA3Q8N6C8 439 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 NACC2Q96BF6 587 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 LHPPQ9H008 270 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 TSPY26PQ9H489 355 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 FAM8A1Q9UBU6 413 aa12.36□□□□□ -0.43
RABGGTA-213ENST00000560127 LRRC53A6NM62 1247 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 KLHL18O94889 574 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 POLBP06746 335 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 SPAM1P38567 509 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 CA7P43166 264 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 KRT33BQ14525 404 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 GSE1Q14687 1217 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 NOMO1Q15155 1222 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 ZIC1Q15915 447 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 PPP2R5EQ16537 467 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 LONRF2Q1L5Z9 754 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 MTFR2Q6P444 385 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 KIRREL2Q6UWL6 708 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 LINC00696Q6ZRV3 163 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 DAAM2Q86T65 1068 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 ZNF655Q8N720 491 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 RNF214Q8ND24 703 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 OR1N1Q8NGS0 311 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 SPATA22Q8NHS9 363 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 N4BP2L2Q92802 583 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 FAF2Q96CS3 445 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 TRIM11Q96F44 468 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 MAGEB10Q96LZ2 347 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 LMF1Q96S06 567 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 SRPK1Q96SB4 655 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 ZNF670Q9BS34 389 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 ISCUQ9H1K1 167 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 SLC25A51Q9H1U9 297 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 DEF6Q9H4E7 631 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 ACTR10Q9NZ32 417 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 IL17CQ9P0M4 197 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 IFNKQ9P0W0 207 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 CDC23Q9UJX2 597 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 HS3ST3B1Q9Y662 390 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 VPS13CQ709C8 3753 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 HCFC1P51610 2035 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 JMJD1CQ15652 2540 aa12.35□□□□□ -0.43
RABGGTA-213ENST00000560127 NSD1Q96L73 2696 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 GLYATL1P3A0A0U1RQE8 302 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 ZSCAN9O15535 394 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 SGTAO43765 313 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 SERPINC1P01008 464 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 ITGAXP20702 1163 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 AKT1P31749 480 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 SSR1P43307 286 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 KIR3DL1P43629 444 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 ADORA2A-AS1P86434 159 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 Q0VFX4 171 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 MFAP5Q13361 173 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 CDSNQ15517 529 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 SLC14A2Q15849 920 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 ASIC2Q16515 512 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 IRAK1BP1Q5VVH5 260 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 XKRXQ6PP77 449 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 TMEM207Q6UWW9 146 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 ISLR2Q6UXK2 745 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 TRIM73Q86UV7 250 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 GAS2L3Q86XJ1 694 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 CPNE8Q86YQ8 564 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 CFAP206Q8IYR0 622 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 ADGRF3Q8IZF5 1079 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 C19orf47Q8N9M1 422 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 C14orf79Q96F83 325 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 THOC3Q96J01 351 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 FERD3LQ96RJ6 166 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 TFB2MQ9H5Q4 396 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 SMOXQ9NWM0 555 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 IP6K2Q9UHH9 426 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 ANAPC7Q9UJX3 599 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 MYO6Q9UM54 1294 aa12.34□□□□□ -0.43
RABGGTA-213ENST00000560127 HEBP2Q9Y5Z4 205 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms