RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 CCT8P50990 548 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 NR1H2P55055 460 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 RPL38P63173 70 aaKnown RBP7.92□□□□□ -1.14
SMAD3-212ENST00000559937 TUBA4AP68366 448 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 ROR2Q01974 943 aaKnown RBP7.92□□□□□ -1.14
SMAD3-212ENST00000559937 PTSQ03393 145 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 PRKCQQ04759 706 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 KCNC3Q14003 757 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 ABRAXAS2Q15018 415 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 KIAA0040Q15053 153 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 C18orf21Q32NC0 220 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-212ENST00000559937 EML3Q32P44 896 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 CNPY1Q3B7I2 92 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 KCTD21Q4G0X4 260 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 RABL3Q5HYI8 236 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 C6orf52Q5T4I8 152 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 FAM219BQ5XKK7 198 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 SLC30A9Q6PML9 568 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 SPATA31D4Q6ZUB0 917 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 AMIGO2Q86SJ2 522 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 TSPAN33Q86UF1 283 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 SPPL2CQ8IUH8 684 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 KLHDC8AQ8IYD2 350 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 L3MBTL4Q8NA19 623 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 DNAJB14Q8TBM8 379 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 NAT14Q8WUY8 206 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 SLC13A3Q8WWT9 602 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 IRF7Q92985 503 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 BHMTQ93088 406 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 DGCR14Q96DF8 476 aaKnown RBP7.92□□□□□ -1.14
SMAD3-212ENST00000559937 CCDC97Q96F63 343 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-212ENST00000559937 LRIG1Q96JA1 1093 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 NSMCE2Q96MF7 247 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 CDK15Q96Q40 435 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 CIB1Q99828 191 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 SH3GL1Q99961 368 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 HEPHQ9BQS7 1158 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 CORO1BQ9BR76 489 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 APOL5Q9BWW9 433 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 OSBPL6Q9BZF3 934 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 DPY30Q9C005 99 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 SEMA6AQ9H2E6 1030 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 C11orf49Q9H6J7 331 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 ZDHHC6Q9H6R6 413 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 PARVBQ9HBI1 364 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 LRTM1Q9HBL6 345 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 VCX3AQ9NNX9 186 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 CD320Q9NPF0 282 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 IL23AQ9NPF7 189 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 PAPOLBQ9NRJ5 636 aaKnown RBP7.92□□□□□ -1.14
SMAD3-212ENST00000559937 C1orf109Q9NX04 203 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 DUS2Q9NX74 493 aaKnown RBP7.92□□□□□ -1.14
SMAD3-212ENST00000559937 THEGQ9P2T0 379 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 GMPR2Q9P2T1 348 aaKnown RBP7.92□□□□□ -1.14
SMAD3-212ENST00000559937 B4GALT6Q9UBX8 382 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 KLQ9UEF7 1012 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 EGFL7Q9UHF1 273 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 ZNF639Q9UID6 485 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 SNX6Q9UNH7 406 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 PDE10AQ9Y233 779 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 MAN2B2Q9Y2E5 1009 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 TMED5Q9Y3A6 229 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 RNF11Q9Y3C5 154 aa7.92□□□□□ -1.14
SMAD3-212ENST00000559937 MUC22E2RYF6 1773 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-212ENST00000559937 KCNE1BA0A087WTH5 132 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 TRIM64CA6NLI5 447 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 C9JVG2 144 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 H3BNH8 94 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 GFYI3L273 518 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 SLC9A3R1O14745 358 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 INPP4BO15327 924 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 MAP3K13O43283 966 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 UGDHO60701 494 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ERN1O75460 977 aaKnown RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 GMNNO75496 209 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 PRSS23O95084 383 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 RASAL1O95294 804 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 LDLRP01130 860 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 FTH1P02794 183 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ASLP04424 464 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 TFAP2AP05549 437 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 UGT2B4P06133 528 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ANXA6P08133 673 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 SRPRAP08240 638 aaKnown RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 HNRNPA1P09651 372 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 HIST1H2AGP0C0S8 130 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ATP1B2P14415 290 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 GGT1P19440 569 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 HIST1H2ADP20671 130 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 LHCGRP22888 699 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 HRH2P25021 359 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 CCR7P32248 378 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 CA8P35219 290 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 CTSOP43234 321 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-212ENST00000559937 RPIAP49247 311 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 POLE2P56282 527 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 CLDN8P56748 225 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 B4GALNT1Q00973 533 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ARHGEF7Q14155 803 aa7.91□□□□□ -1.14
SMAD3-212ENST00000559937 ZNF77Q15935 545 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms