RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 ELOAQ14241 798 aaKnown RBP8.88□□□□□ -0.99
HDDC3-204ENST00000559834 PLEKHN1Q494U1 663 aaPredicted RBP8.88□□□□□ -0.99
HDDC3-204ENST00000559834 ZRANB3Q5FWF4 1079 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 ZNF789Q5FWF6 425 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 ANKRD20A2Q5SQ80 823 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 ANKRD20A1Q5TYW2 823 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 ANKRD20A3Q5VUR7 823 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 MLIPQ5VWP3 458 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 HIST2H2BCQ6DN03 193 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 CDHR3Q6ZTQ4 885 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 TAS2R42Q7RTR8 314 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 CDKL3Q8IVW4 592 aaPredicted RBP8.88□□□□□ -0.99
HDDC3-204ENST00000559834 VSTM4Q8IW00 320 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 ZADH2Q8N4Q0 377 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 LILRA3Q8N6C8 439 aaPredicted RBP8.88□□□□□ -0.99
HDDC3-204ENST00000559834 Q8NA96 180 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 OR52E1Q8NGJ3 308 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 OR13C4Q8NGS5 318 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 DENND1AQ8TEH3 1009 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 NAT14Q8WUY8 206 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 PTERQ96BW5 349 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 SNRNP40Q96DI7 357 aaKnown RBP8.88□□□□□ -0.99
HDDC3-204ENST00000559834 ALS2CR12Q96Q35 445 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 APOL2Q9BQE5 337 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 HEMGNQ9BXL5 484 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 AP1M1Q9BXS5 423 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 KLHL25Q9H0H3 589 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 OR52A5Q9H2C5 316 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 FAM96AQ9H5X1 160 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 ARNT2Q9HBZ2 717 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 LUC7LQ9NQ29 371 aaKnown RBP8.88□□□□□ -0.99
HDDC3-204ENST00000559834 NDOR1Q9UHB4 597 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 POLG2Q9UHN1 485 aa8.88□□□□□ -0.99
HDDC3-204ENST00000559834 SPTAN1Q13813 2472 aaKnown RBP8.88□□□□□ -0.99
HDDC3-204ENST00000559834 FLNCQ14315 2725 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 NOTCH2Q04721 2471 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 A1L4Q6 167 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 ENO4A6NNW6 628 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 AKR1B15C9JRZ8 316 aaPredicted RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 F8W8V4 182 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 QSOX1O00391 747 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 LIN7AO14910 233 aaPredicted RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 KLF7O75840 302 aaPredicted RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 AP2A2O94973 939 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 CBX6O95503 412 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 RBP3P10745 1247 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 PVRP15151 417 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 PDHA2P29803 388 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 MC4RP32245 332 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 SHMT2P34897 504 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 FOLR3P41439 243 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 EIF3EP60228 445 aaKnown RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 MSLNQ13421 630 aaPredicted RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 RAPSNQ13702 412 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 BOP1Q14137 746 aaKnown RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 MYBPC3Q14896 1274 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 SPA17Q15506 151 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 PRR30Q53SZ7 412 aaPredicted RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 DCAF10Q5QP82 559 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 FAM69BQ5VUD6 431 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 RHBDD2Q6NTF9 364 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 TLDC1Q6P9B6 456 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 DARS2Q6PI48 645 aaKnown RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 SPESP1Q6UW49 350 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 IGFL3Q6UXB1 125 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 MAMDC2Q7Z304 686 aaPredicted RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 TMTC1Q8IUR5 882 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 ADGRF3Q8IZF5 1079 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 CISD2Q8N5K1 135 aaKnown RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 ACTL9Q8TC94 416 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 PROKR1Q8TCW9 393 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 NACC2Q96BF6 587 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 CALR3Q96L12 384 aaKnown RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 C5orf34Q96MH7 638 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 TBL1YQ9BQ87 522 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 CHRNA10Q9GZZ6 450 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 ILKAPQ9H0C8 392 aaPredicted RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 XKR8Q9H6D3 395 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 C10orf88Q9H8K7 445 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 ATP13A2Q9NQ11 1180 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 TXLNGQ9NUQ3 528 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 IRAK4Q9NWZ3 460 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 OR6C2Q9NZP2 312 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 IFT80Q9P2H3 777 aaPredicted RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 SRPK3Q9UPE1 567 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 SLC5A6Q9Y289 635 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 ASF1AQ9Y294 204 aa8.87□□□□□ -0.99
HDDC3-204ENST00000559834 PTRH2Q9Y3E5 179 aaKnown RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 COPG1Q9Y678 874 aaKnown RBP8.87□□□□□ -0.99
HDDC3-204ENST00000559834 COL12A1Q99715 3063 aa8.86□□□□□ -0.99
HDDC3-204ENST00000559834 IGLV3-16A0A075B6K0 115 aa8.86□□□□□ -0.99
HDDC3-204ENST00000559834 TRBV5-4A0A0C4DH59 114 aa8.86□□□□□ -0.99
HDDC3-204ENST00000559834 MACROD2A1Z1Q3 448 aa8.86□□□□□ -0.99
HDDC3-204ENST00000559834 ANKUB1A6NFN9 424 aa8.86□□□□□ -0.99
HDDC3-204ENST00000559834 WIPF3A6NGB9 483 aa8.86□□□□□ -0.99
HDDC3-204ENST00000559834 H7C0S8 307 aa8.86□□□□□ -0.99
HDDC3-204ENST00000559834 KCNN4O15554 427 aa8.86□□□□□ -0.99
HDDC3-204ENST00000559834 PSMD3O43242 534 aa8.86□□□□□ -0.99
HDDC3-204ENST00000559834 KRT86O43790 486 aa8.86□□□□□ -0.99
HDDC3-204ENST00000559834 TJP3O95049 919 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms