RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 KLHDC8BQ8IXV7 354 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 ADGRF3Q8IZF5 1079 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 ZBTB2Q8N680 514 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 RBMXL3Q8N7X1 1067 aaKnown RBP12.69□□□□□ -0.38
TPM1-220ENST00000559556 OR52E1Q8NGJ3 308 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 ACTL9Q8TC94 416 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 KRT35Q92764 455 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 TRAPPC9Q96Q05 1148 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 FERD3LQ96RJ6 166 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 NRTNQ99748 197 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 FERMT1Q9BQL6 677 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 DHRS4Q9BTZ2 278 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 HEMGNQ9BXL5 484 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 SLC29A3Q9BZD2 475 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 MVB12BQ9H7P6 319 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 C10orf88Q9H8K7 445 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 VPS37BQ9H9H4 285 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 ARNT2Q9HBZ2 717 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 ZDHHC3Q9NYG2 299 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 SERTAD3Q9UJW9 196 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 EFR3BQ9Y2G0 817 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 PADI2Q9Y2J8 665 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 OTOGQ6ZRI0 2925 aa12.69□□□□□ -0.38
TPM1-220ENST00000559556 TCP11X1B4DZS4 312 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 C9J4A7 227 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 E7EQ34 232 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 H3BMH7 237 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 H7C0S8 307 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 IFRD1O00458 451 aaPredicted RBP12.68□□□□□ -0.38
TPM1-220ENST00000559556 ZNF185O15231 689 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 MAP3K7O43318 606 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 ZNF749O43361 778 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 LDB2O43679 373 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 HBQ1P09105 142 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 GSTM1P09488 218 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 PVRP15151 417 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 PDHA2P29803 388 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 PTPN7P35236 360 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 GSTM4Q03013 218 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 TBX2Q13207 712 aaPredicted RBP12.68□□□□□ -0.38
TPM1-220ENST00000559556 BOP1Q14137 746 aaKnown RBP12.68□□□□□ -0.38
TPM1-220ENST00000559556 DENND5AQ6IQ26 1287 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 SPESP1Q6UW49 350 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 CDHR3Q6ZTQ4 885 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 CDKL3Q8IVW4 592 aaPredicted RBP12.68□□□□□ -0.38
TPM1-220ENST00000559556 IP6K3Q96PC2 410 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 PPP1R2P1Q96PQ5 205 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 TBL1YQ9BQ87 522 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 HGH1Q9BTY7 390 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 FAM96AQ9H5X1 160 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 SLAMF7Q9NQ25 335 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 LUZP4Q9P127 313 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 C5AR2Q9P296 337 aa12.68□□□□□ -0.38
TPM1-220ENST00000559556 FEZ2Q9UHY8 353 aaPredicted RBP12.68□□□□□ -0.38
TPM1-220ENST00000559556 ANKRD17O75179 2603 aaKnown RBP12.68□□□□□ -0.38
TPM1-220ENST00000559556 C2orf74A8MZ97 194 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 AKR1B15C9JRZ8 316 aaPredicted RBP12.67□□□□□ -0.38
TPM1-220ENST00000559556 CCL22O00626 93 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 PJA2O43164 708 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 KLF7O75840 302 aaPredicted RBP12.67□□□□□ -0.38
TPM1-220ENST00000559556 DDAH2O95865 285 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 RBP3P10745 1247 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 ACRV1P26436 265 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 MC4RP32245 332 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 CTNNA1P35221 906 aaKnown RBP12.67□□□□□ -0.38
TPM1-220ENST00000559556 MAGEA1P43355 309 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 TMPRSS15P98073 1019 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 MRPL49Q13405 166 aaKnown RBP12.67□□□□□ -0.38
TPM1-220ENST00000559556 PRPSAP1Q14558 356 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 VWA5B1Q5TIE3 1220 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 MRGPREQ86SM8 312 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 SERPINA9Q86WD7 417 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 AMIGO1Q86WK6 493 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 GPR135Q8IZ08 494 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 SGSM3Q96HU1 749 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 DNAJC1Q96KC8 554 aaKnown RBP12.67□□□□□ -0.38
TPM1-220ENST00000559556 SPATA13Q96N96 652 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 C17orf62Q9BQA9 187 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 SLC7A5P2Q9GIP4 190 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 CHRNA10Q9GZZ6 450 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 ACTR10Q9NZ32 417 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 ICKQ9UPZ9 632 aa12.67□□□□□ -0.38
TPM1-220ENST00000559556 MACROD2A1Z1Q3 448 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 A6NL46 340 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 KCNN4O15554 427 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 STK10O94804 968 aaKnown RBP12.66□□□□□ -0.38
TPM1-220ENST00000559556 AGXTP21549 392 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 GABRA4P48169 554 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 CDKN1CP49918 316 aaPredicted RBP12.66□□□□□ -0.38
TPM1-220ENST00000559556 EIF3EP60228 445 aaKnown RBP12.66□□□□□ -0.38
TPM1-220ENST00000559556 CCDC181Q5TID7 509 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 RHBDD2Q6NTF9 364 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 ZNF449Q6P9G9 518 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 C19orf47Q8N9M1 422 aaKnown RBP12.66□□□□□ -0.38
TPM1-220ENST00000559556 PHC3Q8NDX5 983 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 CCDC110Q8TBZ0 833 aa12.66□□□□□ -0.38
TPM1-220ENST00000559556 TFGQ92734 400 aaPredicted RBP12.66□□□□□ -0.38
TPM1-220ENST00000559556 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.66□□□□□ -0.38
TPM1-220ENST00000559556 OSBPL8Q9BZF1 889 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms