RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 BTN3A1O00481 513 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 PES1O00541 588 aaKnown RBP13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 PRAMEF2O60811 474 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 RNF8O76064 485 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 IGFBP2P18065 325 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 UGT1A4P22310 534 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 SERPINB6P35237 376 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 PMP22Q01453 160 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 RBBP7Q16576 425 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 TMEM220Q6QAJ8 160 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 Q6ZPB1 254 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 POLNQ7Z5Q5 900 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 HSCBQ8IWL3 235 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 LCN9Q8WX39 176 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 SDCCAG3Q96C92 435 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 CSPG4P5Q96PW8 444 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 NRTNQ99748 197 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 GPR63Q9BZJ6 419 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 CLSTN2Q9H4D0 955 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 MRM3Q9HC36 420 aaKnown RBP13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 ZNF160Q9HCG1 818 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 NPDC1Q9NQX5 325 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 SAMSN1Q9NSI8 373 aaKnown RBP13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 IRAK4Q9NWZ3 460 aa13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 DNMT3AQ9Y6K1 912 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC6B-207ENST00000557764 PMPCBO75439 489 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 HLA-DQB2P05538 268 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 ALAS2P22557 587 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 NDUFS1P28331 727 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 SOX11P35716 441 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 CD86P42081 329 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 ADAM8P78325 824 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 TMPRSS15P98073 1019 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 NKG7Q16617 165 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 CES4AQ5XG92 561 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 OVCH1Q7RTY7 1134 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 KBTBD2Q8IY47 623 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 BEND7Q8N7W2 519 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 LRRN4CLQ8ND94 238 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 CCDC110Q8TBZ0 833 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 BRIX1Q8TDN6 353 aaKnown RBP13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 PSMF1Q92530 271 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 MAML1Q92585 1016 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 VPS50Q96JG6 964 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 SPSB2Q99619 263 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 MESP1Q9BRJ9 268 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 SOX17Q9H6I2 414 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 WDR54Q9H977 334 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 FAM8A1Q9UBU6 413 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 ACSL5Q9ULC5 683 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 MRPS2Q9Y399 296 aaKnown RBP13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 ZNF711Q9Y462 761 aa13.78□□□□□ -0.2
TRAPPC6B-207ENST00000557764 MATN3O15232 486 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 SLCO2B1O94956 709 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 MT-CYBP00156 380 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 HPP00738 406 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 MMP2P08253 660 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 SLC35G4P0C7Q5 338 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 GABRA4P48169 554 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 MAMLD1Q13495 774 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 SYCP1Q15431 976 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 DPYSL2Q16555 572 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 TPD52L1Q16890 204 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 TLDC1Q6P9B6 456 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 HOOK3Q86VS8 718 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 LRRC49Q8IUZ0 686 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 MCOLN2Q8IZK6 566 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 SIRT6Q8N6T7 355 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 C19orf47Q8N9M1 422 aaKnown RBP13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 ACVR1CQ8NER5 493 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 FKBP10Q96AY3 582 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 ZCCHC2Q9C0B9 1178 aaKnown RBP13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 GANQ9H2C0 597 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 SLC24A3Q9HC58 644 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 MAGEE1Q9HCI5 957 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 BPIFA1Q9NP55 256 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 NLRC4Q9NPP4 1024 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 HAUS2Q9NVX0 235 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 AMACRQ9UHK6 382 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 ATRQ13535 2644 aa13.77□□□□□ -0.21
TRAPPC6B-207ENST00000557764 C2orf74A8MZ97 194 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 FAM227AF5H4B4 570 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 USP1O94782 785 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 ZWINTO95229 277 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 PRAMEF1O95521 474 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 WDPCPO95876 746 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 ALBP02768 609 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 C8BP07358 591 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 ITGAXP20702 1163 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 MEOX1P50221 254 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 JAM2P57087 298 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 POLR2FP61218 127 aaKnown RBP13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 BECN1Q14457 450 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 PCOLCEQ15113 449 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 ZIC1Q15915 447 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 HSP90AA4PQ58FG1 418 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 FNBP1LQ5T0N5 605 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 TRIM73Q86UV7 250 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 SUN3Q8TAQ9 357 aa13.76□□□□□ -0.21
TRAPPC6B-207ENST00000557764 AGAP11Q8TF27 550 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms