RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ABI3BPQ7Z7G0 1075 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 SLFN11Q7Z7L1 901 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 FBXL14Q8N1E6 418 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 C17orf53Q8N3J3 647 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 DCLK2Q8N568 766 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 SLC5A8Q8N695 610 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 FIG4Q92562 907 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 LRRC45Q96CN5 670 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 GIMAP5Q96F15 307 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 MUS81Q96NY9 551 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PAFAH2Q99487 392 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 TUBA1CQ9BQE3 449 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ZPBPQ9BS86 351 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PITPNM3Q9BZ71 974 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 CHMP5Q9NZZ3 219 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 CPSF2Q9P2I0 782 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 HACL1Q9UJ83 578 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 LAMP5Q9UJQ1 280 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PPIEQ9UNP9 301 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 IBTKQ9P2D0 1353 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ABCC11Q96J66 1382 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 TNIKQ9UKE5 1360 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 LINC00854A0A1B0GVQ3 168 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 H3BNX3 289 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 GPR137BO60478 399 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 TSPAN1O60635 241 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 SNRNP70P08621 437 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 RAB40ALP0C0E4 278 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 SP100P23497 879 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PTAFRP25105 342 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 KIF5BP33176 963 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 CSTF2P33240 577 aaKnown RBP eCLIP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 S100A5P33763 92 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 HSD17B2P37059 387 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 MTHFRP42898 656 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 CCNHP51946 323 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 GTF2A1P52655 376 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 GABPB1Q06547 395 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 BFSP1Q12934 665 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ZRSR1Q15695 479 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 CDO1Q16878 200 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PAPPA-AS1Q5QFB9 102 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 RNASEH2BQ5TBB1 312 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 NOTUMQ6P988 496 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 CCDC190Q86UF4 302 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 SNX32Q86XE0 403 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ERC1Q8IUD2 1116 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 NKAIN4Q8IVV8 208 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 MCUQ8NE86 351 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 GOLGA5Q8TBA6 731 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 SPATA18Q8TC71 538 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ANKRD7Q92527 254 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 GAD1Q99259 594 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 MTERF1Q99551 399 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 KXD1Q9BQD3 176 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 CCDC106Q9BWC9 280 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 UPF3BQ9BZI7 483 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ARRDC1-AS1Q9H2J1 176 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 RAD21L1Q9H4I0 556 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 VCPKMTQ9H867 229 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ZCCHC17Q9NP64 241 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ARGLU1Q9NWB6 273 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 HAO2Q9NYQ3 351 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 C6orf203Q9P0P8 240 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 KLHL9Q9P2J3 617 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF510Q9Y2H8 683 aa1.64□□□□□ -2.15
HIF1A-212ENST00000557538 PTRH2Q9Y3E5 179 aaKnown RBP1.64□□□□□ -2.15
HIF1A-212ENST00000557538 hCG_1809904A0A1W2PP81 198 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 A0A1W2PPE2 198 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 A0A1W2PR64 198 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 SSX4O60224 188 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 SLITRK3O94933 977 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 BAG4O95429 457 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 FGF3P11487 239 aaPredicted RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CASTP20810 708 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 EIF2S3P41091 472 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 SLC9A3P48764 834 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 RWDD2BP57060 319 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 B2MP61769 119 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PHEXP78562 749 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PDE1BQ01064 536 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 GBE1Q04446 702 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 DPYSQ14117 519 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 HLFQ16534 295 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CCDC14Q49A88 953 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 ACCSLQ4AC99 568 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 KRBOX4Q5JUW0 171 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 TMEM198Q66K66 360 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 FAM171BQ6P995 826 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PLXDC2Q6UX71 529 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 TMEM110Q86TL2 294 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 C1orf52Q8N6N3 182 aaKnown RBP1.63□□□□□ -2.15
HIF1A-212ENST00000557538 PI4KAP1Q8N8J0 262 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 KCNH5Q8NCM2 988 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 CFAP61Q8NHU2 1237 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 WASF1Q92558 559 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 TBC1D31Q96DN5 1066 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 MYADMQ96S97 322 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 ABHD1Q96SE0 405 aa1.63□□□□□ -2.15
HIF1A-212ENST00000557538 C16orf70Q9BSU1 422 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 258.2 ms