RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 LRRC69Q6ZNQ3 347 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 FAM92BQ6ZTR7 304 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 KIAA0408Q6ZU52 694 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 PRSS42Q7Z5A4 293 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 AMIGO1Q86WK6 493 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 ANKMY2Q8IV38 441 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 VRK3Q8IV63 474 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 UNC5BQ8IZJ1 945 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 CARFQ8N187 725 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 C2CD4AQ8NCU7 369 aaPredicted RBP10.39□□□□□ -0.75
LINC00239-201ENST00000556973 ZNF248Q8NDW4 579 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 FBXO36Q8NEA4 188 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 MNS1Q8NEH6 495 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 OR52E1Q8NGJ3 308 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 OR5AR1Q8NGP9 310 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 JPH3Q8WXH2 748 aaPredicted RBP10.39□□□□□ -0.75
LINC00239-201ENST00000556973 KLHL6Q8WZ60 621 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 UBXN4Q92575 508 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 USP7Q93009 1102 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 ART4Q93070 314 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 CFAP36Q96G28 342 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 LRRC1Q9BTT6 524 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 ASPSCR1Q9BZE9 553 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 ZNF768Q9H5H4 540 aaKnown RBP10.39□□□□□ -0.75
LINC00239-201ENST00000556973 PPANQ9NQ55 473 aaKnown RBP10.39□□□□□ -0.75
LINC00239-201ENST00000556973 FBXO8Q9NRD0 319 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 FBXO6Q9NRD1 293 aaPredicted RBP10.39□□□□□ -0.75
LINC00239-201ENST00000556973 OCIAD1Q9NX40 245 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 SLC39A1Q9NY26 324 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 KLHL42Q9P2K6 505 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 PCDHGA3Q9Y5H0 932 aa10.39□□□□□ -0.75
LINC00239-201ENST00000556973 EFCAB7A8K855 629 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 C9orf172C9J069 976 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 KIF1CO43896 1103 aaKnown RBP10.38□□□□□ -0.75
LINC00239-201ENST00000556973 NIPSNAP2O75323 286 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 AHSGP02765 367 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 POLR2CP19387 275 aaPredicted RBP10.38□□□□□ -0.75
LINC00239-201ENST00000556973 ETV5P41161 510 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 CARSP49589 748 aaKnown RBP10.38□□□□□ -0.75
LINC00239-201ENST00000556973 CLCN7P51798 805 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 PLTPP55058 493 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 RAB15P59190 212 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 DNTTIP2Q5QJE6 756 aaKnown RBP10.38□□□□□ -0.75
LINC00239-201ENST00000556973 DCAF12Q5T6F0 453 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 TEDDM1Q5T9Z0 273 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 STEAP4Q687X5 459 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 UGT3A1Q6NUS8 523 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 C8orf74Q6P047 294 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 ZNF549Q6P9A3 640 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 GALNT7Q86SF2 657 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 FAM129CQ86XR2 697 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 KMT5CQ86Y97 462 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 CNTN4Q8IWV2 1026 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 ZBED8Q8IZ13 594 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 MMGT1Q8N4V1 131 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 BMPERQ8N8U9 685 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 CFAP61Q8NHU2 1237 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 MAGEC3Q8TD91 643 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 PYROXD1Q8WU10 500 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 KCNJ9Q92806 393 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 FOPNLQ96NB1 174 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 WDR83Q9BRX9 315 aaKnown RBP10.38□□□□□ -0.75
LINC00239-201ENST00000556973 ZPBPQ9BS86 351 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 HGH1Q9BTY7 390 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 DDA1Q9BW61 102 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 DPH1Q9BZG8 443 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 PLAC1Q9HBJ0 212 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 C1GALT1Q9NS00 363 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 MOCS1Q9NZB8 636 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 GRHL1Q9NZI5 618 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 GALPQ9UBC7 116 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 ACSL6Q9UKU0 697 aa10.38□□□□□ -0.75
LINC00239-201ENST00000556973 TDRKHQ9Y2W6 561 aaKnown RBP10.38□□□□□ -0.75
LINC00239-201ENST00000556973 IGHV5-51A0A0C4DH38 117 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 CTAGE15A4D2H0 777 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 TLCD2A6NGC4 264 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 C2orf74A8MZ97 194 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 BTN3A3O00478 584 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 BTN3A1O00481 513 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 POLR1CO15160 346 aaPredicted RBP10.37□□□□□ -0.75
LINC00239-201ENST00000556973 PRAMEF10O60809 474 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 MATN4O95460 622 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 CTAGE8P0CG41 777 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 NELFEP18615 380 aaKnown RBP10.37□□□□□ -0.75
LINC00239-201ENST00000556973 CD82P27701 267 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 GABRB3P28472 473 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 PRDX3P30048 256 aaKnown RBP10.37□□□□□ -0.75
LINC00239-201ENST00000556973 ATP5DP30049 168 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 SKIV2L2P42285 1042 aaKnown RBP10.37□□□□□ -0.75
LINC00239-201ENST00000556973 SEPHS1P49903 392 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 KPNA2P52292 529 aaKnown RBP10.37□□□□□ -0.75
LINC00239-201ENST00000556973 HSD11B2P80365 405 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 MPP1Q00013 466 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 SLC7A5Q01650 507 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 GBX1Q14549 363 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 IL11RAQ14626 422 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 KYNUQ16719 465 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 TTLL9Q3SXZ7 439 aa10.37□□□□□ -0.75
LINC00239-201ENST00000556973 GLE1Q53GS7 698 aaKnown RBP10.37□□□□□ -0.75
LINC00239-201ENST00000556973 CYB5D1Q6P9G0 228 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms