RNA–Protein interactions for RNA: ENST00000556348.1

CCDC85C-205, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5

Gene CCDC85C, Length 556 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-205ENST00000556348 CDC16Q13042 620 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 AIMP2Q13155 320 aaKnown RBP11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 PTPRCAPQ14761 206 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 SLC1A5Q15758 541 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 HIF1AQ16665 826 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 ZNF385CQ66K41 422 aaPredicted RBP11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 ZNF449Q6P9G9 518 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 KDELC1Q6UW63 502 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 H2AFVQ71UI9 128 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 BZW1Q7L1Q6 419 aaKnown RBP11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 CNGA4Q8IV77 575 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 LILRA3Q8N6C8 439 aaPredicted RBP11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 IPMKQ8NFU5 416 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 OR8K1Q8NGG5 319 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 DNAJB14Q8TBM8 379 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 GRHL3Q8TE85 626 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 TFB1MQ8WVM0 346 aaKnown RBP11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 CNDP1Q96KN2 507 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 OLFM3Q96PB7 478 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 AP1M1Q9BXS5 423 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 PITPNM3Q9BZ71 974 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 ASB8Q9H765 288 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 TXLNGQ9NUQ3 528 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 SMOXQ9NWM0 555 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 ACTR10Q9NZ32 417 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 KLHL8Q9P2G9 620 aaPredicted RBP11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 IMPACTQ9P2X3 320 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 NOVA2Q9UNW9 492 aaKnown RBP11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 CDYLQ9Y232 598 aa11.03□□□□□ -0.64
CCDC85C-205ENST00000556348 LRBAP50851 2863 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 A0A1B0GUH1 482 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 ZNF487B1APH4 448 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 AGPSO00116 658 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 GAPDHSO14556 408 aaPredicted RBP11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 KRT1P04264 644 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 EDN3P14138 238 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 CD68P34810 354 aaPredicted RBP11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 SOX8P57073 446 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 PRKG2Q13237 762 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 BCL7AQ4VC05 210 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 AGAP7PQ5VUJ5 663 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 PID1Q7Z2X4 250 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 PPP1R32Q7Z5V6 425 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 FJX1Q86VR8 437 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 AMIGO1Q86WK6 493 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 PHC3Q8NDX5 983 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 OR52E1Q8NGJ3 308 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 HM13Q8TCT9 377 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 PROKR1Q8TCW9 393 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.02□□□□□ -0.652e-6■■■■■ 43.2
CCDC85C-205ENST00000556348 RNF25Q96BH1 459 aaPredicted RBP11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 PDLIM2Q96JY6 352 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 MRGPRX2Q96LB1 330 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 LINC00615Q96LM1 132 aaPredicted RBP11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 AGAP4Q96P64 663 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 NRTNQ99748 197 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 FSD1LQ9BXM9 530 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 SPRTNQ9H040 489 aaPredicted RBP11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 TFB2MQ9H5Q4 396 aaKnown RBP11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 XKR8Q9H6D3 395 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 COPG2Q9UBF2 871 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 DHCR7Q9UBM7 475 aaKnown RBP11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 CRLS1Q9UJA2 301 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 NENFQ9UMX5 172 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 CSAG2Q9Y5P2 127 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 ZGRF1Q86YA3 2104 aa11.02□□□□□ -0.65
CCDC85C-205ENST00000556348 SVILO95425 2214 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 HEATR9A2RTY3 570 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 C3orf70A6NLC5 250 aaPredicted RBP11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 C2orf81A6NN90 581 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 CFAP99D6REC4 459 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 ZSCAN9O15535 394 aaPredicted RBP11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 SRP72O76094 671 aaKnown RBP11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 TPM1P09493 284 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 TNNT1P13805 278 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 GRNP28799 593 aaKnown RBP11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 NR2C2P49116 596 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 FOXL2P58012 376 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 MPP3Q13368 585 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 ZNF169Q14929 603 aaPredicted RBP11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 PRKD1Q15139 912 aaPredicted RBP11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 ZXDCQ2QGD7 858 aaPredicted RBP11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 ASTE1Q2TB18 679 aaPredicted RBP11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 DEFB110Q30KQ9 67 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 NKAIN1Q4KMZ8 207 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 RHBDD2Q6NTF9 364 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 SPESP1Q6UW49 350 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 FAM180AQ6UWF9 173 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 VSIG1Q86XK7 387 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 ZNF655Q8N720 491 aaPredicted RBP11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 C19orf47Q8N9M1 422 aaKnown RBP11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 OR4K2Q8NGD2 314 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 PPP4R1Q8TF05 950 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 COG1Q8WTW3 980 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 FAR1Q8WVX9 515 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 PANX2Q96RD6 677 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 NDC1Q9BTX1 674 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 HGH1Q9BTY7 390 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 MVB12BQ9H7P6 319 aa11.01□□□□□ -0.65
CCDC85C-205ENST00000556348 FAM60AQ9NP50 221 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms