RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
SNX6-203ENST00000555416 SAMD15Q9P1V8 674 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 PILRAQ9UKJ1 303 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 POMT2Q9UKY4 750 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 RUVBL2Q9Y230 463 aaKnown RBP13.28□□□□□ -0.28
SNX6-203ENST00000555416 CRYL1Q9Y2S2 319 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 RPS6KL1Q9Y6S9 549 aa13.28□□□□□ -0.28
SNX6-203ENST00000555416 ATMQ13315 3056 aa13.27□□□□□ -0.28
SNX6-203ENST00000555416 KRT87PA6NCN2 255 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 TLCD2A6NGC4 264 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 STMND1H3BQB6 276 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 POLR1CO15160 346 aaPredicted RBP13.27□□□□□ -0.29
SNX6-203ENST00000555416 SLCO2B1O94956 709 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 EBLN1P0CF75 366 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 PVRP15151 417 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 PPARGP37231 505 aaPredicted RBP13.27□□□□□ -0.29
SNX6-203ENST00000555416 TMPRSS3P57727 454 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 RAB15P59190 212 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 DR1Q01658 176 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 DHX9Q08211 1270 aaKnown RBP13.27□□□□□ -0.29
SNX6-203ENST00000555416 CTBP1Q13363 440 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 HP1BP3Q5SSJ5 553 aaPredicted RBP13.27□□□□□ -0.29
SNX6-203ENST00000555416 BROXQ5VW32 411 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 MRNIPQ6NTE8 343 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 ZNF449Q6P9G9 518 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 KLHL35Q6PF15 583 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 SYT10Q6XYQ8 523 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 UNC5AQ6ZN44 842 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 CCNL2Q96S94 520 aaPredicted RBP13.27□□□□□ -0.29
SNX6-203ENST00000555416 KRT12Q99456 494 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 ASPSCR1Q9BZE9 553 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 KLHL25Q9H0H3 589 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 SPHK1Q9NYA1 384 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 GNPTGQ9UJJ9 305 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 TSR3Q9UJK0 312 aaKnown RBP13.27□□□□□ -0.29
SNX6-203ENST00000555416 TDRKHQ9Y2W6 561 aaKnown RBP13.27□□□□□ -0.29
SNX6-203ENST00000555416 NFS1Q9Y697 457 aa13.27□□□□□ -0.29
SNX6-203ENST00000555416 MAGEB16A2A368 324 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 SLC9B1P1A6NJY1 282 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 K7ENP7 123 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 STK17BO94768 372 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 USP1O94782 785 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 OGNP20774 298 aaKnown RBP13.26□□□□□ -0.29
SNX6-203ENST00000555416 CD82P27701 267 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 PRDX3P30048 256 aaKnown RBP13.26□□□□□ -0.29
SNX6-203ENST00000555416 PEBP1P30086 187 aaKnown RBP13.26□□□□□ -0.29
SNX6-203ENST00000555416 SLC1A2P43004 574 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 ETF1P62495 437 aaKnown RBP13.26□□□□□ -0.29
SNX6-203ENST00000555416 VAC14Q08AM6 782 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 GRB7Q14451 532 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 SOWAHCQ53LP3 525 aaPredicted RBP13.26□□□□□ -0.29
SNX6-203ENST00000555416 ARMC3Q5W041 872 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 ZNF470Q6ECI4 717 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 ZNF549Q6P9A3 640 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 INO80CQ6PI98 192 aaPredicted RBP13.26□□□□□ -0.29
SNX6-203ENST00000555416 PCSK4Q6UW60 755 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 CEACAM20Q6UY09 585 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 GPR155Q7Z3F1 870 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 SDCCAG8Q86SQ7 713 aaPredicted RBP13.26□□□□□ -0.29
SNX6-203ENST00000555416 TRIM73Q86UV7 250 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 AMIGO1Q86WK6 493 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 TBC1D21Q8IYX1 336 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 OR5K2Q8NHB8 316 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 CFAP61Q8NHU2 1237 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 FLVCR1-AS1Q8TAF5 88 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 SNRNP27Q8WVK2 155 aaKnown RBP13.26□□□□□ -0.29
SNX6-203ENST00000555416 ASZ1Q8WWH4 475 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 UBXN4Q92575 508 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 STAMBPL1Q96FJ0 436 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 CD180Q99467 661 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 SLC30A3Q99726 388 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 MENTQ9BUN1 341 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 TRIM31Q9BZY9 425 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 TWSG1Q9GZX9 223 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 TRIT1Q9H3H1 467 aaKnown RBP13.26□□□□□ -0.29
SNX6-203ENST00000555416 FBXO6Q9NRD1 293 aaPredicted RBP13.26□□□□□ -0.29
SNX6-203ENST00000555416 C20orf96Q9NUD7 363 aaPredicted RBP13.26□□□□□ -0.29
SNX6-203ENST00000555416 SLC17A6Q9P2U8 582 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 MED16Q9Y2X0 877 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 TMEM184BQ9Y519 407 aaPredicted RBP13.26□□□□□ -0.29
SNX6-203ENST00000555416 FAM169AQ9Y6X4 670 aa13.26□□□□□ -0.29
SNX6-203ENST00000555416 CACNA1GO43497 2377 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 GSAPA4D1B5 854 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 RAD1O60671 282 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 DLGAP3O95886 979 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 APOA4P06727 396 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 ST6GAL1P15907 406 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 PAMP19021 973 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 PAFAH1B1P43034 410 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 RPL21P46778 160 aaKnown RBP13.25□□□□□ -0.29
SNX6-203ENST00000555416 ITGA8P53708 1063 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 MPP1Q00013 466 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 PLOD1Q02809 727 aaPredicted RBP13.25□□□□□ -0.29
SNX6-203ENST00000555416 C2orf54Q08AI8 447 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 GBX1Q14549 363 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 CRYMQ14894 314 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 GPR19Q15760 415 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 LONRF1Q17RB8 773 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 BBS9Q3SYG4 887 aa13.25□□□□□ -0.29
SNX6-203ENST00000555416 CCSMST1Q4G0I0 132 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms