RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 STMND1H3BQB6 276 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 KIF2AO00139 706 aaPredicted RBP11.77□□□□□ -0.53
SRP54-206ENST00000555317 KLK10O43240 276 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 BANF1O75531 89 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 URI1O94763 535 aaPredicted RBP11.77□□□□□ -0.53
SRP54-206ENST00000555317 TUBB4AP04350 444 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 FGF3P11487 239 aaPredicted RBP11.77□□□□□ -0.53
SRP54-206ENST00000555317 POLR2CP19387 275 aaPredicted RBP11.77□□□□□ -0.53
SRP54-206ENST00000555317 IVDP26440 423 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 AOAHP28039 575 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 SHMT2P34897 504 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 SLC1A2P43004 574 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 UCNP55089 124 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 ADARP55265 1226 aaKnown RBP11.77□□□□□ -0.53
SRP54-206ENST00000555317 HSP90AA5PQ58FG0 334 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 SPANXN3Q5MJ09 141 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 HIBCHQ6NVY1 386 aaPredicted RBP11.77□□□□□ -0.53
SRP54-206ENST00000555317 XKR5Q6UX68 686 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 AMIGO1Q86WK6 493 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 TBC1D21Q8IYX1 336 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 OR52E1Q8NGJ3 308 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 OR5AR1Q8NGP9 310 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 OR5K2Q8NHB8 316 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 LKAAEAR1Q8TD35 194 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 LRRC39Q96DD0 335 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 ZPBPQ9BS86 351 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 RAB17Q9H0T7 212 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 TFB2MQ9H5Q4 396 aaKnown RBP11.77□□□□□ -0.53
SRP54-206ENST00000555317 FBXO6Q9NRD1 293 aaPredicted RBP11.77□□□□□ -0.53
SRP54-206ENST00000555317 IARS2Q9NSE4 1012 aaKnown RBP11.77□□□□□ -0.53
SRP54-206ENST00000555317 OCIAD1Q9NX40 245 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 SOHLH2Q9NX45 425 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 ZC3H7BQ9UGR2 993 aaKnown RBP11.77□□□□□ -0.53
SRP54-206ENST00000555317 CHMP2BQ9UQN3 213 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 SNX24Q9Y343 169 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 MRFAP1Q9Y605 127 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 FAM169AQ9Y6X4 670 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 ZFHX4Q86UP3 3567 aa11.77□□□□□ -0.53
SRP54-206ENST00000555317 BHMG1C9JSJ3 638 aaPredicted RBP11.76□□□□□ -0.53
SRP54-206ENST00000555317 POLR1CO15160 346 aaPredicted RBP11.76□□□□□ -0.53
SRP54-206ENST00000555317 RAD51CO43502 376 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 KIF1CO43896 1103 aaKnown RBP11.76□□□□□ -0.53
SRP54-206ENST00000555317 LIPCP11150 499 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 PKMP14618 531 aaKnown RBP11.76□□□□□ -0.53
SRP54-206ENST00000555317 CDH3P22223 829 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 ACADLP28330 430 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 ELK3P41970 407 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 RPL21P46778 160 aaKnown RBP11.76□□□□□ -0.53
SRP54-206ENST00000555317 ATP1A2P50993 1020 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 PPP1CAP62136 330 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 MRPS25P82663 173 aaKnown RBP11.76□□□□□ -0.53
SRP54-206ENST00000555317 MC2RQ01718 297 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 ABRQ12979 859 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 CTBP1Q13363 440 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 WHAMMP3Q1A5X7 153 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 TTLL9Q3SXZ7 439 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 MSS51Q4VC12 460 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 CTSL3PQ5NE16 218 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 HP1BP3Q5SSJ5 553 aaPredicted RBP11.76□□□□□ -0.53
SRP54-206ENST00000555317 PLEKHS1Q5SXH7 462 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 TMTC4Q5T4D3 741 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 C19orf48Q6RUI8 117 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 UNC5DQ6UXZ4 953 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 KMT5CQ86Y97 462 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 DCUN1D3Q8IWE4 304 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 DENND6AQ8IWF6 608 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 SPACA3Q8IXA5 215 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 CARFQ8N187 725 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 AGGF1Q8N302 714 aaeCLIP11.76□□□□□ -0.53
SRP54-206ENST00000555317 RAB42Q8N4Z0 105 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 ZBTB2Q8N680 514 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 SIDT2Q8NBJ9 832 aaKnown RBP11.76□□□□□ -0.53
SRP54-206ENST00000555317 FAM136AQ96C01 138 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 BIRC8Q96P09 236 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 ERP44Q9BS26 406 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 DPH5Q9H2P9 285 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 XKR8Q9H6D3 395 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 FBXO8Q9NRD0 319 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 FOXJ2Q9P0K8 574 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 CDC23Q9UJX2 597 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 ACSL6Q9UKU0 697 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 PCDHGA3Q9Y5H0 932 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 COMMD10Q9Y6G5 202 aa11.76□□□□□ -0.53
SRP54-206ENST00000555317 C2orf74A8MZ97 194 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 C9orf172C9J069 976 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 BTN3A1O00481 513 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 NIPSNAP2O75323 286 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 GPC4O75487 556 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 SLCO2B1O94956 709 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 ZBTB11O95625 1053 aaPredicted RBP11.75□□□□□ -0.53
SRP54-206ENST00000555317 ERVK-10P10266 1014 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 NELFEP18615 380 aaKnown RBP11.75□□□□□ -0.53
SRP54-206ENST00000555317 TMPRSS3P57727 454 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 HSD11B2P80365 405 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 PDIA2Q13087 525 aaKnown RBP11.75□□□□□ -0.53
SRP54-206ENST00000555317 ANKS6Q68DC2 871 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 C8orf74Q6P047 294 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 CENPUQ71F23 418 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 ZFAND4Q86XD8 727 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 RASGRP3Q8IV61 690 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms