RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 OR52A5Q9H2C5 316 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 RXFP3Q9NSD7 469 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 DGKBQ9Y6T7 804 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 TNFRSF10CO14798 259 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 ITM2AO43736 263 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 RBP1P09455 135 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 TPBGLP0DKB5 382 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 NEFHP12036 1026 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 BDKRB1P46663 353 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 CLCNKAP51800 687 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 KPNA2P52292 529 aaKnown RBP10.51□□□□□ -0.73
TDP1-211ENST00000555178 BST1Q10588 318 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 TGFBIQ15582 683 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 PFKFB4Q16877 469 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.51□□□□□ -0.73
TDP1-211ENST00000555178 IQCHQ86VS3 1027 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 GATAD2AQ86YP4 633 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 LRRC34Q8IZ02 419 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 SLC22A15Q8IZD6 547 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 RHEBL1Q8TAI7 183 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 HM13Q8TCT9 377 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 JPH3Q8WXH2 748 aaPredicted RBP10.51□□□□□ -0.73
TDP1-211ENST00000555178 GLMNQ92990 594 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 ZNF317Q96PQ6 595 aaPredicted RBP10.51□□□□□ -0.73
TDP1-211ENST00000555178 INSM2Q96T92 566 aaPredicted RBP10.51□□□□□ -0.73
TDP1-211ENST00000555178 ZDHHC5Q9C0B5 715 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 MANSC1Q9H8J5 431 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 CAPN10Q9HC96 672 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 OXSMQ9NWU1 459 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 NCKIPSDQ9NZQ3 722 aa10.51□□□□□ -0.73
TDP1-211ENST00000555178 APOBEC3BQ9UH17 382 aaKnown RBP10.51□□□□□ -0.73
TDP1-211ENST00000555178 H3BM21 787 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 TNFP01375 233 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 GIMD1P0DJR0 217 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 CBSLP0DN79 551 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 NME1P15531 152 aaKnown RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 TSPAN8P19075 237 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 ACADLP28330 430 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 CBSP35520 551 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 ACTR1BP42025 376 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 ACTR1AP61163 376 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 TRIM61Q5EBN2 209 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 ZC3H14Q6PJT7 736 aaKnown RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 UBE2R2Q712K3 238 aaPredicted RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 GPSM1Q86YR5 675 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 SLC25A45Q8N413 288 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 PTGR2Q8N8N7 351 aaPredicted RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 STAG3L4Q8TBR4 150 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 LRRC8CQ8TDW0 803 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 GATA5Q9BWX5 397 aaPredicted RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 SHCBP1LQ9BZQ2 653 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 CCDC134Q9H6E4 229 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 FGFR1OP2Q9NVK5 253 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 KLHL42Q9P2K6 505 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 PDE10AQ9Y233 779 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 A6NCN8 305 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 ARHGEF33A8MVX0 844 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 LIN7AO14910 233 aaPredicted RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 KPNA5O15131 536 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 BIRC5O15392 142 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 CHRNGP07510 517 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 VIMP08670 466 aaKnown RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 ENO3P13929 434 aaPredicted RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 GFAPP14136 432 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 KELP23276 732 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 ATP5F1P24539 256 aaPredicted RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 MPLP40238 635 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 NAGLUP54802 743 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 C21orf59P57076 290 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 PTK2BQ14289 1009 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 SF3A2Q15428 464 aaKnown RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 LIPMQ5VYY2 423 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 FRA10AC1Q70Z53 315 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 ADAMTSL2Q86TH1 951 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 RASGRP3Q8IV61 690 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 CCNYL1Q8N7R7 359 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 OR5AR1Q8NGP9 310 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 RDH11Q8TC12 318 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 GPBAR1Q8TDU6 330 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 LMX1AQ8TE12 382 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 ASB11Q8WXH4 323 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 THOC1Q96FV9 657 aaKnown RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 NSUN5Q96P11 429 aaKnown RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 TIMM29Q9BSF4 260 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 RMI1Q9H9A7 625 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 CD274Q9NZQ7 290 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 ZNF624Q9P2J8 865 aaPredicted RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 PLAGL1Q9UM63 463 aa10.5□□□□□ -0.73
TDP1-211ENST00000555178 RIF1Q5UIP0 2472 aaKnown RBP10.5□□□□□ -0.73
TDP1-211ENST00000555178 C17orf113A0A1B0GUU1 675 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 GPR89AB7ZAQ6 455 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 FFAR2O15552 330 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 TRIM13O60858 407 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 IPO13O94829 963 aaKnown RBP10.49□□□□□ -0.73
TDP1-211ENST00000555178 EPN2O95208 641 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 MATN4O95460 622 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 GPR89BP0CG08 455 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 DMPKQ09013 629 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 OVGP1Q12889 678 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 PRKG2Q13237 762 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms