RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TMEM145Q8NBT3 493 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 KLHL6Q8WZ60 621 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 SMARCD2Q92925 531 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 DGCR14Q96DF8 476 aaKnown RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ERMAPQ96PL5 475 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 MTFR1LQ9H019 292 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 PRDM16Q9HAZ2 1276 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ADAM18Q9Y3Q7 739 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 DOPEY2Q9Y3R5 2298 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 C1RP00736 705 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 FOSL1P15407 271 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 PTDSS1P48651 473 aaKnown RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TAF10Q12962 218 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 HDAC7Q8WUI4 952 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ACOT12Q8WYK0 555 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TTYH2Q9BSA4 534 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF717Q9BY31 904 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 OR10A4Q9H209 315 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 CLK4Q9HAZ1 481 aaKnown RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 EVLQ9UI08 416 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 A0A1B0GV50 99 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF35P13682 527 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 RPL17P18621 184 aaKnown RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 EDNRAP25101 427 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 SLC26A5P58743 744 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 BRMS1LQ5PSV4 323 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 PDSS1Q5T2R2 415 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ANO7Q6IWH7 933 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 MED27Q6P2C8 311 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TAS1R3Q7RTX0 852 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 C4orf19Q8IY42 314 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 GATAD2BQ8WXI9 593 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TUBGCP5Q96RT8 1024 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 HINT2Q9BX68 163 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 CLCA3PQ9Y6N3 262 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 SALL1Q9NSC2 1324 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TECPR2O15040 1411 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 APOC4-APOC2K7ER74 178 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ARPC2O15144 300 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 NTSR2O95665 410 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 APOC2P02655 101 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 CSTF2P33240 577 aaKnown RBP eCLIP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 GLP1RP43220 463 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ALG10BQ5I7T1 473 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 DCLRE1AQ6PJP8 1040 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ZER1Q7Z7L7 766 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TMEM126BQ8IUX1 230 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TNFRSF25Q93038 417 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TM9SF2Q99805 663 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 LPIN3Q9BQK8 851 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 SNRNP25Q9BV90 132 aaKnown RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 CCSER2Q9H7U1 834 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 SMURF2Q9HAU4 748 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 PLATP00750 562 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ANXA4P09525 319 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 GNG2P59768 71 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 NFKB2Q00653 900 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TUSC3Q13454 348 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 RNASEH2BQ5TBB1 312 aaKnown RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 SPPL2CQ8IUH8 684 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 RBM4BQ9BQ04 359 aaKnown RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 NDC1Q9BTX1 674 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 RBM4Q9BWF3 364 aaKnown RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 FBRSQ9HAH7 460 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ANKHQ9HCJ1 492 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 IL1RAPQ9NPH3 570 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 KDM6BO15054 1643 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 MEN1O00255 615 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 WFS1O76024 890 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 CDK14O94921 469 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 GPR68Q15743 365 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TMEM17Q86X19 198 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 RASGEF1CQ8N431 466 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 DAGLBQ8NCG7 672 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ASB7Q9H672 318 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 PAK6Q9NQU5 681 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 MED11Q9P086 117 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 LOXHD1Q8IVV2 1947 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TET3O43151 1660 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 DPPA5A6NC42 116 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 SIGLEC16A6NMB1 481 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 CCL22O00626 93 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 GNAO1P09471 354 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 RAB4AP20338 218 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 GNRHRP30968 328 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 CAP1Q01518 475 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 MAD2L1BPQ15013 274 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ABHD13Q7L211 337 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 LAS2Q8IYD9 372 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 C12orf29Q8N999 325 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 KIAA1143Q96AT1 154 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 MECRQ9BV79 373 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 GDF3Q9NR23 364 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 CYTH4Q9UIA0 394 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TLR5O60602 858 aa6.77□□□□□ -1.32
SYNE2-216ENST00000555002 PPM1BO75688 479 aa6.77□□□□□ -1.32
SYNE2-216ENST00000555002 GJB1P08034 283 aa6.77□□□□□ -1.32
SYNE2-216ENST00000555002 CBLP22681 906 aa6.77□□□□□ -1.32
SYNE2-216ENST00000555002 RRP1BQ14684 758 aaKnown RBP6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms