RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 LRRC73Q5JTD7 316 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 CERCAMQ5T4B2 595 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 ZNF776Q68DI1 518 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-212ENST00000554486 WDR93Q6P2C0 686 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 BRAT1Q6PJG6 821 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 PPP1R21Q6ZMI0 780 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 SYT13Q7L8C5 426 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 DSG4Q86SJ6 1040 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 LINC00523Q86TU6 105 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 TMPRSS6Q8IU80 811 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 MPP5Q8N3R9 675 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 SPEM1Q8N4L4 309 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 AADATQ8N5Z0 425 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 EIF1ADQ8N9N8 165 aaKnown RBP6.27□□□□□ -1.41
SCFD1-212ENST00000554486 GPR156Q8NFN8 814 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 HCAR2Q8TDS4 363 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 JPH3Q8WXH2 748 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-212ENST00000554486 GCDHQ92947 438 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-212ENST00000554486 MRGPRX1Q96LB2 322 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 FMO2Q99518 471 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 DPYSL5Q9BPU6 564 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 ADGRE3Q9BY15 652 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 PABPC3Q9H361 631 aaKnown RBP6.27□□□□□ -1.41
SCFD1-212ENST00000554486 XAB2Q9HCS7 855 aaKnown RBP6.27□□□□□ -1.41
SCFD1-212ENST00000554486 SERGEFQ9UGK8 458 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 PHTF1Q9UMS5 762 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 RPL26L1Q9UNX3 145 aaKnown RBP6.27□□□□□ -1.41
SCFD1-212ENST00000554486 GON4LQ3T8J9 2241 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 EML5Q05BV3 1969 aa6.27□□□□□ -1.41
SCFD1-212ENST00000554486 MUC3AQ02505 3323 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 A0A0J9YYE9 177 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 A0A0U1RQS6 177 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 A0A1W2PQ67 120 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 TCRBV21S2A2A0A5A6 115 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 PMS2P1A4D2B8 440 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 CAPN8A6NHC0 703 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 NPIPB15A6NHN6 443 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-212ENST00000554486 SDR42E2A6NKP2 422 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 E7ESA3 106 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 EIF3HO15372 352 aaKnown RBP eCLIP6.26□□□□□ -1.41
SCFD1-212ENST00000554486 RNASEH1O60930 286 aaKnown RBP6.26□□□□□ -1.41
SCFD1-212ENST00000554486 ATG13O75143 517 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 RFPL1O75677 317 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 SCGB1D2O95969 90 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 TRBC1P01850 177 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 VSIG10L2P0DP72 767 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 ALADP13716 330 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 ADRB3P13945 408 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 AOC1P19801 751 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 HNF1BP35680 557 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 MMP12P39900 470 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 SLC6A9P48067 706 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 NPY2RP49146 381 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 CLCN5P51795 746 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 DGKEP52429 567 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 TAS2R38P59533 333 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 SARNPP82979 210 aaKnown RBP6.26□□□□□ -1.41
SCFD1-212ENST00000554486 SEMG2Q02383 582 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 CNTN1Q12860 1018 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 MTAPQ13126 283 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 POU6F1Q14863 301 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 CDKN3Q16667 212 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 UGP2Q16851 508 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 MST1LQ2TV78 715 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 GAGE13Q4V321 117 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 DNAJC21Q5F1R6 531 aaKnown RBP6.26□□□□□ -1.41
SCFD1-212ENST00000554486 PIP5KL1Q5T9C9 394 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 FAM46CQ5VWP2 391 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 DENND2CQ68D51 928 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 KIAA1324Q6UXG2 1013 aaKnown RBP6.26□□□□□ -1.41
SCFD1-212ENST00000554486 ERN2Q76MJ5 926 aaKnown RBP6.26□□□□□ -1.41
SCFD1-212ENST00000554486 TSPAN33Q86UF1 283 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 CACUL1Q86Y37 369 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 TTC30BQ8N4P2 665 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 HDDC3Q8N4P3 179 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 DNAAF3Q8N9W5 541 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 HMGB4Q8WW32 186 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 FAM131CQ96AQ9 280 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 EID2BQ96D98 161 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 RMDN1Q96DB5 314 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 SIPA1Q96FS4 1042 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 SCRN2Q96FV2 425 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 MCCC1Q96RQ3 725 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-212ENST00000554486 LYSMD1Q96S90 227 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 FRMD8Q9BZ67 464 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-212ENST00000554486 TXLNGYQ9BZA5 131 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 MFSD1Q9H3U5 465 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 SEC61A2Q9H9S3 476 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 PLAC1Q9HBJ0 212 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 MAGEE1Q9HCI5 957 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 SAYSD1Q9NPB0 183 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 CD93Q9NPY3 652 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 SYBUQ9NX95 663 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 ZNF180Q9UJW8 692 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 OAZ3Q9UMX2 235 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 ITM2BQ9Y287 266 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 TEX264Q9Y6I9 313 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 PLXND1Q9Y4D7 1925 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 ABCA7Q8IZY2 2146 aa6.26□□□□□ -1.41
SCFD1-212ENST00000554486 A8MX80 341 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms