RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 SPATA13Q96N96 652 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 TRAPPC9Q96Q05 1148 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 OSBPL8Q9BZF1 889 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 OR52A5Q9H2C5 316 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 TSPY26PQ9H489 355 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 ARNT2Q9HBZ2 717 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 PLEKHB1Q9UF11 243 aaPredicted RBP22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 ICE1Q9Y2F5 2266 aa22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 USP9YO00507 2555 aaPredicted RBP22.37■■□□□ 1.17
SMARCD1-209ENST00000550477 DDX3YO15523 660 aaKnown RBP22.36■■□□□ 1.17
SMARCD1-209ENST00000550477 ZNF749O43361 778 aa22.36■■□□□ 1.17
SMARCD1-209ENST00000550477 AP2A2O94973 939 aa22.36■■□□□ 1.17
SMARCD1-209ENST00000550477 IPO7O95373 1038 aaKnown RBP22.36■■□□□ 1.17
SMARCD1-209ENST00000550477 MARCKSL1P49006 195 aa22.36■■□□□ 1.17
SMARCD1-209ENST00000550477 ZNF140P52738 457 aaPredicted RBP22.36■■□□□ 1.17
SMARCD1-209ENST00000550477 LCN10Q6JVE6 187 aa22.36■■□□□ 1.17
SMARCD1-209ENST00000550477 TMTC1Q8IUR5 882 aa22.36■■□□□ 1.17
SMARCD1-209ENST00000550477 KRT35Q92764 455 aa22.36■■□□□ 1.17
SMARCD1-209ENST00000550477 TCTN2Q96GX1 697 aa22.36■■□□□ 1.17
SMARCD1-209ENST00000550477 ACTR10Q9NZ32 417 aa22.36■■□□□ 1.17
SMARCD1-209ENST00000550477 PCDHA3Q9Y5H8 950 aa22.36■■□□□ 1.17
SMARCD1-209ENST00000550477 F8W8V4 182 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 PEX12O00623 359 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 ALPPP05187 535 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 ACRV1P26436 265 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 SHMT2P34897 504 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 CTNNA1P35221 906 aaKnown RBP22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 RWDD2BP57060 319 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 PRKG2Q13237 762 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 SSPNQ14714 243 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 PTCHD3Q3KNS1 767 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 SERPINA9Q86WD7 417 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 ZBTB2Q8N680 514 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 CLEC1AQ8NC01 280 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 GORASP1Q9BQQ3 440 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 NUDT9Q9BW91 350 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 MFRPQ9BY79 579 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 POLG2Q9UHN1 485 aa22.35■■□□□ 1.17
SMARCD1-209ENST00000550477 GOLGA6L9A6NEM1 432 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 H7C0S8 307 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 LIN7AO14910 233 aaPredicted RBP22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 PSMD3O43242 534 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 DDAH2O95865 285 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 PLOD1Q02809 727 aaPredicted RBP22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 OLIG2Q13516 323 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 KYNUQ16719 465 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 VWA5B1Q5TIE3 1220 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 MLIPQ5VWP3 458 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 SPESP1Q6UW49 350 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 FAM198BQ6UWH4 519 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 ARHGEF18Q6ZSZ5 1173 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 CCDC110Q8TBZ0 833 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 SMAD5Q99717 465 aaKnown RBP22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 HGH1Q9BTY7 390 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 NDOR1Q9UHB4 597 aa22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 SPTAN1Q13813 2472 aaKnown RBP22.34■■□□□ 1.17
SMARCD1-209ENST00000550477 IGLV3-16A0A075B6K0 115 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 PJA2O43164 708 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 LDB2O43679 373 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 OR2B3O76000 313 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 FTH1P02794 183 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 CAPN1P07384 714 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 PDHA2P29803 388 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 OTX2P32243 289 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 PTPN7P35236 360 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 NSG1P42857 185 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 CACNG1Q06432 222 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 TBX2Q13207 712 aaPredicted RBP22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 MSLNQ13421 630 aaPredicted RBP22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 ATP1A4Q13733 1029 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 BOP1Q14137 746 aaKnown RBP22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 PARP6Q2NL67 630 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 ZNF789Q5FWF6 425 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 ADGRF3Q8IZF5 1079 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 C19orf47Q8N9M1 422 aaKnown RBP22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 TTC13Q8NBP0 860 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 STYXQ8WUJ0 223 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 TM9SF4Q92544 642 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 DNAJC1Q96KC8 554 aaKnown RBP22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 TTC1Q99614 292 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 AP1M1Q9BXS5 423 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 KLHL25Q9H0H3 589 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 XKR8Q9H6D3 395 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 TXLNGQ9NUQ3 528 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 NLE1Q9NVX2 485 aaPredicted RBP22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 IRAK4Q9NWZ3 460 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 ASF1AQ9Y294 204 aa22.33■■□□□ 1.17
SMARCD1-209ENST00000550477 PIKFYVEQ9Y2I7 2098 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 TRBV5-4A0A0C4DH59 114 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 IPO13O94829 963 aaKnown RBP22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 FOLR3P41439 243 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 DCDP81605 110 aaKnown RBP22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 SPARCL1Q14515 664 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 LYPLAL1Q5VWZ2 237 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 SLC6A19Q695T7 634 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 DENND5AQ6IQ26 1287 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 CDHR3Q6ZTQ4 885 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 IQCKQ8N0W5 287 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 RNF214Q8ND24 703 aa22.32■■□□□ 1.16
SMARCD1-209ENST00000550477 PRR7Q8TB68 274 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms